|
Name : ctaD (SMc00010) Accession : NP_385011.1 Strain : Sinorhizobium meliloti 1021 Genome accession: NC_003047 Putative virulence/resistance : Unknown Product : cytochrome C oxidase polypeptide I transmembrane protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 992942 - 994630 bp Length : 1689 bp Strand : + Note : Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGGCTGGAACAGCCGTTCATCACGATCAACGCCATGATCATTCCGATCATGGCCACGCGGACCACGCGCACAAGCCGCT GACCTTCTTTCAGCGCTGGTTCCTATCGACCAACCACAAGGACATCGGTACGCTCTACCTGATCTTCGCGATCATCGCCG GCATCATCGGCGGCACGCTGTCGGTCTTCATGCGCGCCGAACTGCAGGAGCCGGGCATCCAGATCTTCCACGGTCTGGCC CAGATGGTCTATGGTTTCGAGGGTGATGCTGCCATCGACGGCGGCAAGCACATGTTCAACGTCTTCACGACCGCTCACGC GCTGATCATGATCTTCTTCATGGTCATGCCGGCGCTGATCGGCGGCTTCGCCAACTGGATGGTGCCGATCATGATCGGTG CGCCGGACATGGCGTTCCCGCGCATGAACAACATTTCCTTCTGGCTGATCGTGCCGGCCTTCTTGCTGGTGCTGCTTTCG ATGTTCGTCGAAGGTCCTGCAGGCGCCTATGGCGCGGGCGGCGGCTGGACGATCTATCCGCCATTCTCGACATCCGGCAT GCCCGGGCCCGCGATGGATCTCGCGATCCTCGGCCTGCACATCGCCGGCGCCTCGTCGATCCTCGGCGCGATCAACTTCA TCACCACCATCCTCAACATGCGCGCTCCGGGCATGACGCTGCACAAGATGCCGCTCTTTGCCTGGTCGGTTCTGATCACC GCCTTCCTGCTCCTGCTCTCGCTGCCGGTTCTCGCAGGCGCGATCACCATGCTGCTGACGGACCGCAACTTCGGCACGAC CTTCTTCGCGCCGGAAGGCGGCGGCGACCCGATCCTGTTCCAGCACCTGTTCTGGTTCTTCGGTCACCCGGAAGTGTACA TTCTGATTCTGCCGGGCTTCGGCATCGTCAGCCACATCATCTCGACCTTCTCGCGCAAGCCGATCTTCGGTTATCTCGGC ATGGCCTACGCCATGGTCGCGATCGGCGCCGTCGGCTTCATCGTGTGGGCGCACCACATGTACACGGTCGGCATGTCGCT CCAGACACAGCGCTACTTCGTCTTCGCGACGATGGTCATCGCCGTGCCGACGGGTGTGAAGATCTTCTCCTGGATCGCGA CGATGTGGGGCGGCTCGATCCGCTTCGCGACCCCGATGGTCTGGGCGATCGGCTTCATCTTCCTGTTCACCGTCGGCGGC GTCACGGGTGTCCAGCTCGCCAATGCCGGCCTCGACCGTGCGCTGCACGACACCTATTACGTGGTGGCGCACTTCCACTA CGTGCTGTCGCTCGGCGCCGTCTTCGCAATCTTCGCGGCCTGGTACTACTGGTTCCCGAAGATGACCGGCTACATGTACT CGGAGTTTCTCGGCAAACTGCATTTCTGGGTGATGTTCGTCGGCGTGAACCTGATCTTCTTCCCGCAGCATTTCCTCGGG CTCGCAGGCATGCCGCGCCGTTACATCGACTATCCGGACGCCTTTGCCGGCTGGAACATGGTTTCGTCCTACGGCTCCTA CATCGCGGCAGTCGGCGTGCTGATCTTCCTCTTCTGTGTCGCCGAAGCTTTCGCGAAGAAGCGCGTTGCGGGGGATAACC CCTGGGGCGAAGGCGCCAACACGCTGGAATGGCAGCTGTCTTCGCCGCCGCCGTTCCACCAGTGGGAGCAGCTCCCGCGG ATCAAGTGA Protein sequence : MAGTAVHHDQRHDHSDHGHADHAHKPLTFFQRWFLSTNHKDIGTLYLIFAIIAGIIGGTLSVFMRAELQEPGIQIFHGLA QMVYGFEGDAAIDGGKHMFNVFTTAHALIMIFFMVMPALIGGFANWMVPIMIGAPDMAFPRMNNISFWLIVPAFLLVLLS MFVEGPAGAYGAGGGWTIYPPFSTSGMPGPAMDLAILGLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFAWSVLIT AFLLLLSLPVLAGAITMLLTDRNFGTTFFAPEGGGDPILFQHLFWFFGHPEVYILILPGFGIVSHIISTFSRKPIFGYLG MAYAMVAIGAVGFIVWAHHMYTVGMSLQTQRYFVFATMVIAVPTGVKIFSWIATMWGGSIRFATPMVWAIGFIFLFTVGG VTGVQLANAGLDRALHDTYYVVAHFHYVLSLGAVFAIFAAWYYWFPKMTGYMYSEFLGKLHFWVMFVGVNLIFFPQHFLG LAGMPRRYIDYPDAFAGWNMVSSYGSYIAAVGVLIFLFCVAEAFAKKRVAGDNPWGEGANTLEWQLSSPPPFHQWEQLPR IK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 2e-86 | 46 |
