Gene Information

Name : SMa1801 (SMa1801)
Accession : NP_436239.1
Strain :
Genome accession: NC_003037
Putative virulence/resistance : Virulence
Product : Reverse transcriptase, maturase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 1022639 - 1023898 bp
Length : 1260 bp
Strand : -
Note : Identical (99%) to reverse transcriptase/maturase [Sinorhizobium meliloti]. ACCESSION CAA72334.

DNA sequence :
ATGACTTCGGAAAGTACGACAGACAAGCCGTTTCGAATTGAGAAACGTCGAGTGTACGAAGCTTACAAAGCGGTCAAAGC
CAACCGTGGCGCGGCCGGGGTGGACGGGCAGACGCTGGAGATATTTGAGAAAGACCTTGCAGCAAACCTCTACAAGATCT
GGAATCGGATGTCCTCGGGAACCTACTTCCCGCCGCCGGTGCGCGCCGTCTCCATTCCGAAGAAGGCTGGAGGCGAAAGG
GTTTTGGGTGTGCCCACGGTCAGCGATCGGATCGCGCAGATGGTGGTCAAGCAGATGATCGAGCCGGATTTGGACTCCCT
CTTTCTTCCGGACTCCTACGGTTACAGGCCGGGAAAATCGGCCCTGGATGCCGTCGGAGTGACGCGTCAGCGGTGCTGGA
AGTATGATTGGGTTTTGGAATTCGACATCAAAGGGCTATTTGACAATCTTCCGCATGATCTCTTGCTGAAGGCGGTCAGA
AAAGACGTCAAATGCAACTGGGCTCTGCTCTACATCGAAAGATGGCTGACTGCGCCTATGGAAAAGAACGGAGAAGTCAT
CGAGCGGTCACGCGGTACCCCACAGGGAGGCGTGGTTAGCCCGATCTTGGCGAATCTCTTTCTGCACTATGCATTTGATC
TCTGGATGACGCGGACGCATCCCGACCTTCCATGGTGTCGATATGCCGACGATGGTCTTGTTCACTGCCAGAGCGAGCAA
CAAGCCGAAGCCCTCAAGGTGGAGCTGAGTTCTCGGCTGGCAGCGTGCGGACTTCAGATGCATCCGACAAAGACCAAGAT
TGTCTACTGCAAGGATCAACGGCGCAGGGAGGCGTATCCGAATGTCACGTTCGACTTTCTCGGGTATCAGTTCCGGCCGC
GACGGGTGGCGAACACACAGTGGGACGAGTTCTTCTGTGGCTACACGCCTGCGGTCAGTCCGACGGCGCTCAAGTCGATG
CGGGCAACGATCAAAAGTTTGAACATCCCGCGGCAGACGCCGGGGACGCTGGCCGAAATAGCCAAACAGCTCAATCCACT
CCTTCGGGGATGGATTGCCTACTATGGACGGTACAGTCGTTCGGCCCTGTCCACTCTGGCTGATTACGTTAATCAGAAAC
TCAGGGCTTGGATCAGGCGAAAGTTCAAACGCTTTCAGTCCCATAAGACACGCGCCAGCCTCTTCTTGCGAAAGCTGGCG
CGGGAAAATCCGGGGCTGTTCGTGCATTGGAAGGCGTTCGGAACGAACACGTTTACCTGA

Protein sequence :
MTSESTTDKPFRIEKRRVYEAYKAVKANRGAAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSIPKKAGGER
VLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRCWKYDWVLEFDIKGLFDNLPHDLLLKAVR
KDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQGGVVSPILANLFLHYAFDLWMTRTHPDLPWCRYADDGLVHCQSEQ
QAEALKVELSSRLAACGLQMHPTKTKIVYCKDQRRREAYPNVTFDFLGYQFRPRRVANTQWDEFFCGYTPAVSPTALKSM
RATIKSLNIPRQTPGTLAEIAKQLNPLLRGWIAYYGRYSRSALSTLADYVNQKLRAWIRRKFKRFQSHKTRASLFLRKLA
RENPGLFVHWKAFGTNTFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 5e-118 55
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 2e-86 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMa1801 NP_436239.1 Reverse transcriptase, maturase VFG1512 Protein 1e-86 47