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Name : SMa1466 (SMa1466) Accession : NP_436046.1 Strain : Genome accession: NC_003037 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 807254 - 808369 bp Length : 1116 bp Strand : - Note : glimmer prediction; global similarity to GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUCA; Pfam domain similarity to ABC transporters; adjacent ORFS encode components of the choline transport system DNA sequence : ATGATCCGGCTCGAGAATCTGACGAAACACTACGGCCCGGCGCATGATCCGCTCATTGCCGTCGACAATGTGAGTCTAGA CTTACCCACCGGAGAGATCTGCGTGCTGCTCGGTCCCTCGGGATGCGGCAAGACGACGACGATGAAGATGATCAACCGTC TGATCCAGCCAACCAGCGGCAAGGTCTTCATCAACGGCAAGGACACGAGCACCATCGATCCGATCAAGCTGCGGCGGACC ATCGGCTATGTGATCCAGCAGATCGGCCTTTTCCCGAACAAGACGGTCGAGGAAAATATCTGTGTCGTGCCGGACCTTCT CGGCTGGGATCGCCGCAAGTCGCGCGCCCGCGCCAAAGAGCTCCTCGAGCTTGTCGGCCTCCAGCCCGACCTTTTCCTCA AGCGCTACCCGAAGGAACTTTCAGGCGGCCAGCAGCAGCGTGTCGGCGTTCTGCGCGCCCTTGCGGCCGATCCGCCGGTC ATGCTGATGGACGAGCCGTTCGGGGCGATCGATCCGATCAACCGCGAAGCCATCCAGGAGGAGTTCCTGAAGATGCAGCG GGAGATCCGCAAGACGATCATCTTCGTCTCGCACGATCTCGACGAAGCGGTGAAGATGGCGGACAAGATCGCTATCTTCC GCAGCGGCAGGCTCGAACAATATGCCGCGCCCGACGAATTGCTCGCCCGTCCCGCCAACAGCTTCATCGAAGACTTCCTG GGCTCGGACCGGGCACTCAAGCGACTGAGGCTCGTCTCGGTGCGCGACGCCATGGAGACGGGTTTCATCACGGTCCGGAG CTCGGACTCGGTCGAGCATGCGCTTGAGCGCATGCGATCGTCGCGCAGCGCTGCAGTCTTTGTGCTGAACGCCGACGGCG CACCGCAATCTCTCTTGAGCGAGCAGGTGGCGGAGCTGCGCTCCGGTACGGTGGGCGATCATGCGGAACCGGTAAAGTCT GCCGTCCCGACCACCGGCGATCTTAGGCAGGCCGTGTCGATAATGTTCGCCCACGACATGCCGCTGCTGCCCTGCGTCGA CGAGGGCGGTCGGATGGCAGGCGTGATGAGCTACCGTTCCATCGTGCACTATCTCGCCCATGGAGCAAAGGCATGA Protein sequence : MIRLENLTKHYGPAHDPLIAVDNVSLDLPTGEICVLLGPSGCGKTTTMKMINRLIQPTSGKVFINGKDTSTIDPIKLRRT IGYVIQQIGLFPNKTVEENICVVPDLLGWDRRKSRARAKELLELVGLQPDLFLKRYPKELSGGQQQRVGVLRALAADPPV MLMDEPFGAIDPINREAIQEEFLKMQREIRKTIIFVSHDLDEAVKMADKIAIFRSGRLEQYAAPDELLARPANSFIEDFL GSDRALKRLRLVSVRDAMETGFITVRSSDSVEHALERMRSSRSAAVFVLNADGAPQSLLSEQVAELRSGTVGDHAEPVKS AVPTTGDLRQAVSIMFAHDMPLLPCVDEGGRMAGVMSYRSIVHYLAHGAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-53 | 47 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 6e-54 | 47 |
