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Name : SMa1434 (SMa1434) Accession : NP_436029.1 Strain : Genome accession: NC_003037 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 789214 - 790866 bp Length : 1653 bp Strand : - Note : glimmer prediction; global similarity to AgaD from A. tumefaciens, an agropinic acid permease (GI: 2665708); global similarity to hypothetical ABC transporter ATP-binding proteins (GI: 4062401); Pfam domain homology to ABC transporters DNA sequence : ATGAACGCGCCGGACAAACCCATTCTGCGGATCGACAAACTCACGGTCGACTTCCTGTCCGAAGGCGATCCCGTGCGTGC CGTCGATGACGTCTCGTTCGATGTCTGCCCGGGCGAAACCCTCGTCATCCTCGGTGAGAGTGGATCGGGAAAGAGCGTCA GCACCGGAACGGTCATGGGGCTGATCGACTGTCCGCCGGGCGACATCGTCTCGGGCTCGCTGGTTTTCGACGGCACCGAC CTTTCCCGCCTCGATGACGAAGGCCGGCGTGAACTGAACGGCCGCCGCATCGCCATGATCTTCCAGGACCCGCTGGCCTA TCTCAACCCGGTCTACACCGTCGGCAGGCAGATCGCCGAGGTGTTCGAGAGCCACGGGGAAGGCGAGGGCGGTGCGGTGC GCGACAAGGTCGTTCGGCTGCTCGAACGGGTCGGAATTCCGGAAGCGGACGAGCGGATCGACTATTATCCGCACCAGTTC TCGGGCGGACAGAGGCAGCGCGTGATGATCGCCATGGCGATCGCGCTGAAGCCGGATATTCTGATCGCCGACGAGCCGAC TACGGCACTCGACGTCAGCGTTCAGGCACAGATCCTCGAACTCCTGCGGGACCTGCAGCGCGAGACCGGCATGGCTCTGA TCATGATCACCCATGATCTCGAGGTCGCCGCGGCCATGGCGGATCGGATCATCGTAATGAACGGCGGCAAGGTGGTGGAG AGCGGCAAGGCCGAGGACGTCTTTACCAATCCGAGCCACGCCTATACCCGCCGGCTGATGTCGGCCGTGCCCCATGCCGA CGCGCCGAAAGCGCCTCGGAATGCCGCACAAGGCGAGGTCCTGTTGCAGGTCGCCCATTTGAGCAAGCATTACAAGCTGG GGTCCGGCCCGTTTTCGCCCAAGCGGGAGTTCAGGGCCGTGGACGATGTCAGTTTCACGCTTCGTCGTGGGGAAACCGTC GGGATCGTCGGCGAGTCCGGTTCGGGTAAATCCAGCATTGCACGCATGCTGCTGAGACTGAACGAGCCGACATCGGGCGC GGCACTCTTTGCCGGCGAGGACATTTTCGAGCTCAAGGGCAAGGCGCTCGATGGTTTCCGCCGAAGGGTGCAGATGGTGT TCCAGGATCCGTTCGGGTCGATGAACCCGCGCATGAACGTCCGTTCGATCATATCCGAGCCTTGGGCGATCCACAGGGAC ATTCTGCCGCGCGAACGCTGGAACGAGCGGGTCGTGGAGCTGCTGGAGCTTGTCGGCCTGAAGGCAGAGCATGCTGCACG GCATCCGCATCAGTTTTCGGGCGGGCAGCGGCAGCGCATCGCCATTGCCCGGGCGCTCGCCAGCGAACCCGAGCTGATCG TCTGCGACGAGGCGGTCTCGGCGCTCGACGTGTCGATCCAGATGCAGGTCATCGAGCTTCTGGCCGATCTGCGCCAGCGC CTCGGCCTCTCCTACGTCTTCATTACCCACGATCTGCCCATCGTGCGCCAATTCGCCGACCGAATCCTGGTGATGCAGCG CGGCAGGATCGTCGAGGAAGGCGAGACCGAAGCCCTTTTCGTCTCGCCTCAGCACGAATACACGCAAGCTCTGCTGAGGG CCGTCCCGCAGCCGAAGTGGTTGCGGAGCGATCCGGCGCCGATCGCAGGGTAG Protein sequence : MNAPDKPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPGDIVSGSLVFDGTD LSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQF SGGQRQRVMIAMAIALKPDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVE SGKAEDVFTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGPFSPKREFRAVDDVSFTLRRGETV GIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKALDGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRD ILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQR LGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVPQPKWLRSDPAPIAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-93 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-66 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-66 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-66 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-66 | 43 |
