Gene Information

Name : virB10 (SMa1303)
Accession : NP_435956.1
Strain :
Genome accession: NC_003037
Putative virulence/resistance : Virulence
Product : VirB10-like transmembrane secretion protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2948
EC number : -
Position : 712238 - 713410 bp
Length : 1173 bp
Strand : -
Note : glimmer prediction; similar to VirB10, a transmembrane protein of unknown function found in the virB protein complex and type IV secretion systems; found in virB operon

DNA sequence :
ATGGCTCAACAAGATGAAAACCGGATACCGGGCGAGCGGGCCGAGACGGTTTCCGGCAGGAAGATCGATAACAATCCCAT
GCTGAAGCGCGGCGCCGTGGCGCTGGCGGTCGTTGCCTTTGTCGGCTTCGCCTTGTGGTCGATGGGCGGGGAAGGGAAAC
GGCAGGACAATGCCCAGCCGGAGCGCGTGGTCATCCGACAAACGACGAACTTCGAACCGGCCAAGGAGAAATTGGAACCC
GTTCAGCCAGTGCCGGAAGTGAAGCTGCCAACCCCCGTCGTGACCGAGGAGGTCAAGGAGGAAGACCCACTGCTCGACTC
GGCGCGGCGGGCGCCCGTCATCGCCTATAGCAGCGGACAGAAAAACGCGACATCGCACCGTGACAGCGAAAATCCTCCCA
TTTCGGCGGACAGCAATTTCATACCGCTCGATGGAGACACGATGGGCCAGAATACGGCCAATGCCGATGAACAGCGGTTC
AACGGGTTGCTGCGGCCGACCAGGCTTGAGGGCTCACGCGCCGGCACGCTCGGCAACCGGAACTTCATCGTTGCGATGGG
AACCTCAATACCCTGTGTCCTGGAAACTGCCATGGCATCTGATCAACCTGGCTTCACAAGCTGCGTGGTCAACCGTGACG
TCCTCTCGGACAATGGCCGCGTCGTGCTGATGGAGAAGGGCACGCAGGTTGTCGGCGAGTACCGCGGTGGTCTCCAGCGA
GGACAGAAGCGCCTCTTCGTGCTCTGGTACCGTGCGAAAACCCCGAATGGCGTCATCGTCACATTGGCCTCGCCGGCAAC
GGATGCCCTCGGCCGAGCCGGCGTGGATGGCTACGTCGACACTCACTGGTGGGAGCGGTTTGGAAGTGCGCTTCTCCTTT
CCATCGTAGGCGACGCCACGAGCTATGCCAGCAGCCGCCTGCAGGACAGCGACGTCGACGCGCAGAACACGACGAGCGCA
GGCCAGCAAGCGGCGGCGGTCGCTGTCGAGCAATCGATCAATATTCCGCCGACGCTCAACAAACATCAGGGTGAACTGGT
CTCGATCTTCGTGGCGCGCGATCTCGACTTTTCTGGTGTCTACGGATTGCGGGTGACCGGGTCGAAAAACAAGGTCCTCG
ACCGGGCGGTGCTGGGGGACTTCAGGCCGCAGTCAACGCTCGTGACGAAGTAG

Protein sequence :
MAQQDENRIPGERAETVSGRKIDNNPMLKRGAVALAVVAFVGFALWSMGGEGKRQDNAQPERVVIRQTTNFEPAKEKLEP
VQPVPEVKLPTPVVTEEVKEEDPLLDSARRAPVIAYSSGQKNATSHRDSENPPISADSNFIPLDGDTMGQNTANADEQRF
NGLLRPTRLEGSRAGTLGNRNFIVAMGTSIPCVLETAMASDQPGFTSCVVNRDVLSDNGRVVLMEKGTQVVGEYRGGLQR
GQKRLFVLWYRAKTPNGVIVTLASPATDALGRAGVDGYVDTHWWERFGSALLLSIVGDATSYASSRLQDSDVDAQNTTSA
GQQAAAVAVEQSINIPPTLNKHQGELVSIFVARDLDFSGVYGLRVTGSKNKVLDRAVLGDFRPQSTLVTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB10 YP_001610006.1 VirB10 protein Virulence Not named Protein 8e-80 55
vblB10 YP_001610350.1 VblB10 protein Virulence Not named Protein 5e-73 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB10 NP_435956.1 VirB10-like transmembrane secretion protein VFG2239 Protein 3e-79 53