|
Name : SMa1073 (SMa1073) Accession : NP_435826.1 Strain : Genome accession: NC_003037 Putative virulence/resistance : Unknown Product : TRm23b IS ATP-binding protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1484 EC number : - Position : 586541 - 587278 bp Length : 738 bp Strand : + Note : belongs to a possible new IS related to IS21 and IS1162 (IS3 family), also found in NGR234; identical to SMA0776 DNA sequence : ATGCTTGCCCATCCAACACTGGATAAATTGAATGCCATGGGCCTGGCCGGCATGGCAAAGGCCTTCAGTGAACTCGTTGC CAACGGCGAAAGCGAACATCTCTCGCACGCCGAATGGCTCGGACTGCTGCTCGAACGGGAATGGAGCTCCCGTTACGATC GGAAGCTTGCGGCACGCCTCAGGTTTGCCAAGCTTCGCCACCAGGCGACCCCGGAAGATGTCGATTATCGCGCCGAACGC GGCCTCGACCGTGCTCTCTTCATGAAACTGCTCGGTGGCGACTGGATCAACGCTCATGACAATCTGGCCATTTGCGGACC CTCGGGTGTCGGAAAGAGTTGGTTGGCTTGCGCTCTCGGCCACAAGGCTTGCCGAGACGATCGCTCAGTTCTCTATCAGC GTGTCCCAAGGCTGTTTGCCCAGCTTGCGCTCGCGCGTGGTGATGGCCGCTACGCCCGGCTGCAACGAACCTTGGGCCAT GTTCAGCTCCTGATACTGGATGATTGGGGGCTCGAGCCGCTCAACGAACAGGCCCGCCACGACCTGCTGGAAATCCTCGA AGATCGCTATGGACGCAAATCAACGATCATTACCAGCCAACTTCCCGTGTCCGCATGGCACGGCGTCATTGGCGACCCAA CCTACGCCGATGCCATACTCGACAGGTTGGTCCACAATGCCCACCGCATCGAATTGAGCGGCGATAGTCTGCGCCGAAAT CTACCGCGCAAAGCTTGA Protein sequence : MLAHPTLDKLNAMGLAGMAKAFSELVANGESEHLSHAEWLGLLLEREWSSRYDRKLAARLRFAKLRHQATPEDVDYRAER GLDRALFMKLLGGDWINAHDNLAICGPSGVGKSWLACALGHKACRDDRSVLYQRVPRLFAQLALARGDGRYARLQRTLGH VQLLILDDWGLEPLNEQARHDLLEILEDRYGRKSTIITSQLPVSAWHGVIGDPTYADAILDRLVHNAHRIELSGDSLRRN LPRKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3529 | YP_854246.1 | ISEc12 ATP-binding protein | Not tested | PAI I APEC-O1 | Protein | 3e-41 | 46 |
| unnamed | CAC39295.1 | hypothetical protein | Not tested | LPA | Protein | 1e-41 | 46 |
| ORF_5 | AAZ04416.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 1e-41 | 46 |
