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Name : SMa1070 (SMa1070) Accession : NP_435825.1 Strain : Genome accession: NC_003037 Putative virulence/resistance : Unknown Product : TRm23a transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 584979 - 586571 bp Length : 1593 bp Strand : + Note : glimmer prediction; Recombinase/integrase domain; identical to part of SMA0779 and SMA0787 DNA sequence : ATGCCTGCGGAGAGACTGGAGATGCGGCGTGTCCGCGAGATATTGAGATATCGCTTCGAACAAGGACTTGGCCACAAGTC GATCGCGGTTCGGGTTGGAGCTGCGCCATCGACGGTGCGCGAGACGCTTCGGCGTGCGGCCATTGCGGAGCTATCGTGGC CGTTGGGTGACGACGTCAGCGATGCAGTCCTGGAAGCGGCGCTTTACAAGGCAGCCGGGACGAAGACGGGTCATCGTCGG AGCCCTGAGCCGGACTGGGCGCAGGTCCACCGCGAGCTGAAGCGCAAGCATATGACGCTGCAGATCCTTTGGGACGAATA CATCAGCCGTTATCCGGACGGCTATCGCTACAGTCGCTTCTGTGACCTCTACCGCGGCTGGGCGATGAAGTTGCCTGTGA CGATGCGGCAGGACCACGCGGCCGGCGACAAGCTGTTCGTCGACTACGCCGGCGACACGGTCACGGTTGTCGTTGATCGG CTGTCCGGCAAGACACGGCAGGCGCACCTGTTCGTGGCGGTTCTGGGAGCATCCAGCCTTTCATATGCGCAGGCACGTTG GAGCGAGACGCTTCCCGACTGGATTGAATGCCATATCCTGGCCCTGGAGTACTTTGGCGGTGCGCCAGCCTTGCTGGTTC CCGACAATGCCAAGGTAGCGATCATCAAGGCCTGCCACTTCGATCCCCAGGTAAACCGGACGTATTGCGGGATGGCGGCC CATTATGGCAGCGCCGTCTTGCCGACGCGGCCGCGACGCCCGCGGGACAAGGCGAAAGTGGAAGCTGCGGTTCGTATCGT CGAACGTTGGCTGTTGGGCCGGCTGCGCCATCGCATCTTCTATAGTTTGGCCGAGGTCAATGCGGCGATTGGCCAATTGC TCCATGATCTCAATGATAAGCGCGTTCTGCGCCGTGTCGGCGCCACGCGTCGCCAATTGTTCGAGGAGCTTGATCGTCCG GCTTTGCGACCACTGCCTGTCGAACGCTATATTTTTGCCGAGTGGCGTATCCGGCGTGCCGGGCTGGATTATCACGTCGA GATCGAGCGGCACTATTATTCCGTTCCCTATCGCTTTGCCCGCGAGCAGGTCGAGGCTCGTATCACCGCCAATACGATCG AGATCTTCCACAAGGGCGAGCGTATTGCTGCCCATCGCCGTTCCAGCGGCAACGGCAAGCACACACGATCCCCGATCATA TGCCCTCTGCGCATCGCCGCTTTGCCGACTGGACGATTGAACGGATTCAACGCGAAGCCTCTGCGATGGGGCCGGATGTT GCGCTGTTGTGCGAGCGCATTCTTGCCGACAGGCCTCATCCCGAGCAGGGCTTTCGAGCTTGCCTCGGCATCATCCGCCT CAACAAGAGCTTCGGCCGCGACAGGGTCAATGCCGCTTGCGGGCGTGCGTTGGAGATTGGCGCACGAACCTATGGCTCGG TGCGATCCATCCTCGACAATCACCTTGACCGGACGGCTGCCTCAAATGGAGCGGCGCCGCATGAACCGATCCATCACGCC AACATCCGCGGACCTCGCTATTACCACTAAGGAGAACGAAAGATGCTTGCCCATCCAACACTGGATAAATTGA Protein sequence : MPAERLEMRRVREILRYRFEQGLGHKSIAVRVGAAPSTVRETLRRAAIAELSWPLGDDVSDAVLEAALYKAAGTKTGHRR SPEPDWAQVHRELKRKHMTLQILWDEYISRYPDGYRYSRFCDLYRGWAMKLPVTMRQDHAAGDKLFVDYAGDTVTVVVDR LSGKTRQAHLFVAVLGASSLSYAQARWSETLPDWIECHILALEYFGGAPALLVPDNAKVAIIKACHFDPQVNRTYCGMAA HYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGQLLHDLNDKRVLRRVGATRRQLFEELDRP ALRPLPVERYIFAEWRIRRAGLDYHVEIERHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTRSPII CPLRIAALPTGRLNGFNAKPLRWGRMLRCCASAFLPTGLIPSRAFELASASSASTRASAATGSMPLAGVRWRLAHEPMAR CDPSSTITLTGRLPQMERRRMNRSITPTSADLAITTKENERCLPIQHWIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 5e-84 | 45 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 7e-84 | 45 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 3e-84 | 45 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 2e-78 | 44 |
