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Name : nrtC (SMa0581) Accession : NP_435551.1 Strain : Genome accession: NC_003037 Putative virulence/resistance : Unknown Product : nitrate ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 310425 - 311225 bp Length : 801 bp Strand : - Note : glimmer prediction Excellent match (e-87) to nitrate transport protein ATP binding component nasD from Klebsiella oxytoca starting at amino acid 35 of glimmer prediction. Met33 of glimmer prediction has good SD sequence and was called SMA0581 start. ChrD, DNA sequence : ATGACCAAGAGCTATCTTTCACTTGAACTGCTGGACAAGAGCTTCGAACGCGGCGGAACACGCACCGAGGTTCTCAAACA GGTCTCACTTACAGTCGACAAGGGTGAATTCATCTCGATCATCGGCCATTCTGGCTGCGGCAAGTCGACCCTGCTTAACA TCGTCGGTGGGCTGACACAGGCGACGACCGGCGTCGTCCTCCTCGACGGCAAGGTCGTCGACGAACCTGGACCGGACCGC GCCGTCGTCTTCCAGAACCACTCGCTGCTGCCGTGGCTCACGGTCTACGAAAACGTCCGGCTGGCCGTCGACAAGGTGTT TTCGAGAACCCGCAACAAGCAGGAACGCCATGAATGGACGATGCGCAACCTCGAGCTAGTGCAGATGGCGCATGCCGCCG AGAAGCACCCCTCAGAGGTCTCCGGCGGCATGAAGCAGCGCGTCGGCATCGCCCGGGCGCTTGCCATGGAACCGAAGGTG CTGCTTCTCGACGAGCCCTTCGGGGCGCTCGACGCCCTGACCCGCGCGCATCTGCAGGACCAGGTCATGCAGATTCACGC GACGCTCGGCAATACGGTGCTGATGATCACGCATGACGTCGACGAAGCGGTCCTGCTTTCGGACCGCATCGTCATGATGA CCAATGGACCCTCTGCACGAGTCGGTGAAATCCTCGACGTGCCGCTCGCGCGTCCGCGTCGTCGCATTGAGCTCGCCTCC GATCGAACTTACCTGACATGTCGCGAGTCGGTGCTGAAGTTCCTCTACGAACGCCACCGCTTCGTCGAAGCTGCAGAGTG A Protein sequence : MTKSYLSLELLDKSFERGGTRTEVLKQVSLTVDKGEFISIIGHSGCGKSTLLNIVGGLTQATTGVVLLDGKVVDEPGPDR AVVFQNHSLLPWLTVYENVRLAVDKVFSRTRNKQERHEWTMRNLELVQMAHAAEKHPSEVSGGMKQRVGIARALAMEPKV LLLDEPFGALDALTRAHLQDQVMQIHATLGNTVLMITHDVDEAVLLSDRIVMMTNGPSARVGEILDVPLARPRRRIELAS DRTYLTCRESVLKFLYERHRFVEAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 8e-39 | 41 |
