Gene Information

Name : SMa0508 (SMa0508)
Accession : NP_435513.1
Strain :
Genome accession: NC_003037
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 274983 - 275714 bp
Length : 732 bp
Strand : +
Note : glimmer prediction; ABC transporter family, PF00005

DNA sequence : 
ATGTCCGTTGTCGTCGCCAAAAATATTCGAAAGAGCTTCGGTGGGCTCCAAGTGCTGAAGGGCGTATCGCTCACGGTCGA
AGGCGGCGAGGTTGTCGCCTTGATCGGCGGCAGCGGCTCCGGCAAGAGCACTTTCCTGCGCTGCCTGAACGGCCTCGAAA
GCGTCGATTCCGGTGAGATCGAGGTCGCCGGCCACCGAATGTCGCGCAAACCGGCCGAGCTTCGCCGGTTGCGGCGCGAT
GTCGGCATTGTCTTCCAGAGTTACAATCTCTTCCCGCATCTCACCGCCGGCGAAAACATCATGCTCGCCCCGGTCCAGGT
GAAGGGAATCGGCAAGGACGCCGCGCGATCCGAGGCGAAACGCTGTCTGTCGCTCGTCGGACTCGGCGATCGTTTCGAGG
CCTATCCCGACATGCTCTCCGGGGGCCAGCAGCAGCGCGTCGCCATCGCCCGCTCGCTCGCCATGCAGCCGAAGGTCCTT
CTTTTCGACGAGGTCACGTCGGCCCTCGACCCGGAACTCACCGGTGAAGTGCTCGCCGTCATCGAAAAGCTGGCGCGCGA
CGGCATGACCATGATCCTCGTGACCCATGAAATGGGCTTCGCCCGGCGCGTGGCCAATCGGACGATCTTCATGAGGGACG
GCATCATCCACGAGGAAGGGCCTTCCGCCGAATTCTTCTCTTCGCCGAAAACGCCTGAACTTCGAGCCTTCCTCCACGCG
GAAGTAGGCTGA

Protein sequence : 
MSVVVAKNIRKSFGGLQVLKGVSLTVEGGEVVALIGGSGSGKSTFLRCLNGLESVDSGEIEVAGHRMSRKPAELRRLRRD
VGIVFQSYNLFPHLTAGENIMLAPVQVKGIGKDAARSEAKRCLSLVGLGDRFEAYPDMLSGGQQQRVAIARSLAMQPKVL
LFDEVTSALDPELTGEVLAVIEKLARDGMTMILVTHEMGFARRVANRTIFMRDGIIHEEGPSAEFFSSPKTPELRAFLHA
EVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMa0508 NP_435513.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-26 43
SMa0508 NP_435513.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-27 42