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Name : gabD3 (SMa0260) Accession : NP_435385.1 Strain : Genome accession: NC_003037 Putative virulence/resistance : Unknown Product : GabD3 succinate-semialdehyde dehdyrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 146683 - 148146 bp Length : 1464 bp Strand : - Note : glimmer prediction; similar to E. coli GabD (accession P25526) and A. tumefaciens AttK (accession AAD43988); Aldehyde family, PF00171 DNA sequence : ATGACGTTTCATGCCAAGTTTTCCGGCTACGCCGATCCTGCCCTGCATGCCGCGGGCCTCTACATTGGCGGCAAATGGCA AAGCGGCAGCGGAATAACCGTTCTCGACCCTTCGACCGGTAATCTGCTGGCCGAGGTCGCCGACGCCTCCATCGAGGACG CACAGCGCGCAGTCGATGCCGCGGATGCCGCTGCGGCCGGGTGGCGCGCCACTCCAGCTCGCCAGCGCTCGGAAATCCTG CGACGCTGGTATCAGCTGATGACACAGCACGCCGAGGAGCTTGCAACGCTCATAGCACTGGAAAACGGCAAGGCCCTGGC CGACGCACGCGGCGAAGTCGCTTATGCCGCCGAATTCTTCCGCTGGTACGCTGAAGAGGCGACCCGCATTCCGGGCGAAT TCCGGCACACTCCCTCCGGGTCGCACAATATCCTCGTTGACCATGAGCCGATCGGCATTGCCGTCCTGATCACGCCCTGG AATTTCCCGGCCGCTATGGCGACGCGCAAGATCGGGCCCGCCCTTGCCGCCGGCTGCACGGTGATCCTGAAACCTGCCTC GGAGACGCCGTTGACAGCCTATGCCATGGCCCGTCTCGGGGAAGAGGCGGGCGTCCCGCCTGGCGTCGTCAACGTGCTGA CCACAAGCAATCCAGGCGGAATAACGAATGCAATGCTCGCCGATCCGCGCGTTCGAAAGCTTTCATTCACCGGCTCGACC GGCGTTGGCCGCGTTCTACTTGCCGAAGCCGCCAAGTCGGTCGTCAGCTGCTCGATGGAGCTCGGCGGCAACGCGCCTTT CATCGTGTTCGACGACGCGGACCTCGAGGTGGCACTCGACGGTGCGATGATCGCCAAGATGCGAAACGCTGGAGAAGCCT GCACTGCCGCCAATCGTTTCTATGTCCAGGCGGGCATCCATGATGCGTTTGTCGCCGGCCTCACGGCGCGGATGAAGTCA CTGAAGCTCGGCCCCGGCTACGATCCCGAGACGCAATGTGGACCCATGATCACGCAAAACGCCGTCCGCAAGATCGACCG GCTCGTCTCAGAGGCACTCGCCGCGGGTGCGCGGGCAACGACCGGCGGCAAACCGCTCACGGAAAACGGGTACTTCTATC CGCCGACGGTACTCGAAAACGTCCCCGTAAACGCGTCGATCGCACGTGAGGAAATCTTCGGACCGGTCGCGCCTGTCTAC AAGTTCGAAAGCGACGACGAGGCGATCCGCCTCGCAAACAATACGGAGTATGGCCTCGCCGCGTACATCTACAGCCGCGA TCTCAAACGTGCGATGAAGGTCGGCAAGCGCATCGAAACCGGCATGCTCGGCATCAACAGGGGCCTGATGTCAGACCCCG CCGCTCCCTTCGGCGGCGTCAAACAGAGCGGCCTTGGCCGCGAAGGCGGCGTGACGGGCATCCTGGAATTCATGGAGCCG AAATATTTCGCAGTTGATTATTGA Protein sequence : MTFHAKFSGYADPALHAAGLYIGGKWQSGSGITVLDPSTGNLLAEVADASIEDAQRAVDAADAAAAGWRATPARQRSEIL RRWYQLMTQHAEELATLIALENGKALADARGEVAYAAEFFRWYAEEATRIPGEFRHTPSGSHNILVDHEPIGIAVLITPW NFPAAMATRKIGPALAAGCTVILKPASETPLTAYAMARLGEEAGVPPGVVNVLTTSNPGGITNAMLADPRVRKLSFTGST GVGRVLLAEAAKSVVSCSMELGGNAPFIVFDDADLEVALDGAMIAKMRNAGEACTAANRFYVQAGIHDAFVAGLTARMKS LKLGPGYDPETQCGPMITQNAVRKIDRLVSEALAAGARATTGGKPLTENGYFYPPTVLENVPVNASIAREEIFGPVAPVY KFESDDEAIRLANNTEYGLAAYIYSRDLKRAMKVGKRIETGMLGINRGLMSDPAAPFGGVKQSGLGREGGVTGILEFMEP KYFAVDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-103 | 51 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-94 | 44 |
