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Name : rhtA (SMa2414) Accession : NP_436511.1 Strain : Genome accession: NC_003037 Putative virulence/resistance : Virulence Product : RhtA rhizobactin receptor precursor Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1629 EC number : - Position : 1315745 - 1317985 bp Length : 2241 bp Strand : + Note : TonB-dependent siderophore receptor; glimmer prediction; identical to RhtA, rhizobactin receptor, from Sinorhizobium meliloti, Q9Z3Q5, AAD09419. Predicted TonB dependent receptor in C-terminal region DNA sequence : ATGGGCAACAATGAGAATGGCGGCATAAGCTTTTGCGTCTTCGTCGTCGTAATTGGATTTGGCACGGGTGCTGTTGCGCA GGAGCCAGCGAATCAATCCGAAGCTGTGACGAGCCTGGAAGAAATCGTAGTCACCGGCGGACGATCCGCTCAGCAGATTT CTGAAATCGCGCGCACCATTTACGTCGTCGATTCGGATCAGATCCAGGCCGAGGCCCGGTCGGGCAAGACGCTGCAGCAG ATTCTGGGCGAAACCATTCCGAGCTTCGACCCCGCCAGCGACGGAGCGCGTACGTCATTCGGCCAGAACCTGCGTGGCCG GCCACCACTGATCCTTGTCGACGGTGTCTCGATGAACTCGGCGCGCTCGCTGAGCCGACAATTCGATGCCATCGATCCAT TCAACATCGAACGGGTGGAGGTCCTGTCTGGGGCAACTGCAATCTACGGCGGGAACGCAACCGGCGGCATCATCAACATC ATCACGAAGAAGGGCAAGGACGCGGAACCGGGCCTGCATGCGGAAGTGACCGGCGGCATGGGCAGCGGCTTTGCCGGCAG CCAGGACTTCGACCGCAATGCGGCGGGTGCGGTCACCTATAACAGCGAAAACTGGGATGCCCGCCTTTCGATCGCCGGCA ACAGGACCGGCGCCTTTTATGACGGCAGCGGCACGCTGCTGATCCCCGACATCACGCAGACGTCCACCGCATTCAACGAG CGCATCGACCTGATGGGGTCTATCGGCTACCAGATCGACGACGACCGTCGCGTCGAATTTTCCGGGCAATATTTCGACAG CAAGCAGGACTCGGATTACGGGCTTTATTACGGGCCCTTCTTTGCAGCGCTCGCCGACCCGAGCCTGTTTGAAACCCGTT CCGGATACGAGTCCGACTTCAATCCGCAGACACGCCGCTCGATGTTGAACGTCACCTATACCGATAATGACGTTTTCGGT CAGCAGCTATTGCTTCAGGGATCTTACCGGACTGAGCGGATAAAGTTCCATCCCTTCCCTGCTTCGGGCAATAGCGAAAC GGGTCCTTACTTTTACGGCAGTTCGCAGGACACAGACTATTACGGCATCAGGGCTGCCTTGGTTGCGGAACCCACCGACG CGCTGAAAATCACCTATGGCATCGATGCGGATATGGATTCCTTCACGGCGCGTCAGAACATCTTCGACATGGTGGCAGCC GGGCAATCCGGGGGGCTCGATTTCAATACGATCGGCAAGACCGGTCTTTATCCATCCATCGATGTCTCCACCGTTGCCGG CTTTGCTGAGGCCTCGTACGAGGCTACCGACAGGCTCACTCTGAACGGCGGGGTGCGCTATCAGTTCGTCAACACTGAGG TATCCGACTTCATCGGAGCGGCTCAGCAGGTCGCCATCCTGCAGGGCAGAGCAACGTCTGCCGACACCATACCTGGCGGC GAAGTCAATTACGACGCCGCTTTGTTCAGTGCAGGCGCAACCTACCAGTTGACGAATACGCAGCAGGTCTACGCCAATTT CAGCCAGGGCTTCGAACTACCAGATCCGGCCAAGTACTATGGAATTGGCAACTACTCCTTCTCCGGTGGACACTACACGC TTGTCAATAGCGTGAACGTGGGCGATTCCGCGCTCGAGGCGATCAAGACCAACTCATTCGAAATCGGCTATCGTCTCGAT GACGGCACCTTCAATCTTGAAACGGCGGCCTACTACTCGCTCTCCGATCGTTCCATCAATCTCAATCGCTCATCGCTTGC CGTTGAGATCATCGATCGGGAGAGACGCGTCTATGGCATCGAAGGAAAGGCGGGCGTAAAGCTCGATCATGGCTTCGATG TTGGAGTTCTGGGGCACTGGGTCAGAACCGAGGTCAAGGGAGCCGACGGTTGGGAAAAGGACTCCGTCGGCAGCGCGAGC GTCTCCAAACTCGGCGGCTATGTCGGCTGGACCAATGACGCTCTCAGCCTGAGGTTTTCCGGTCAGCACATCTTCGAACT CACCGACGCCCAGAATTTCACGATCGACGATTATACGTTGTTTGATCTAACCGGCGGCTACAGGTTCGAGAATACCGACA CGACGCTGAATTTCGGTATCCATAACGTCTTCGATACTGATTACACCACCGTCTGGGGCTCTCGCGCCAAAGCCCTTTAC GGCGGCCTAGCCGACGAGTCGGTGTTCGACTACAAGGGCCGCGGCCGCACGTTCGCGGTCTCGCTGACAAAGGTTTTTTA A Protein sequence : MGNNENGGISFCVFVVVIGFGTGAVAQEPANQSEAVTSLEEIVVTGGRSAQQISEIARTIYVVDSDQIQAEARSGKTLQQ ILGETIPSFDPASDGARTSFGQNLRGRPPLILVDGVSMNSARSLSRQFDAIDPFNIERVEVLSGATAIYGGNATGGIINI ITKKGKDAEPGLHAEVTGGMGSGFAGSQDFDRNAAGAVTYNSENWDARLSIAGNRTGAFYDGSGTLLIPDITQTSTAFNE RIDLMGSIGYQIDDDRRVEFSGQYFDSKQDSDYGLYYGPFFAALADPSLFETRSGYESDFNPQTRRSMLNVTYTDNDVFG QQLLLQGSYRTERIKFHPFPASGNSETGPYFYGSSQDTDYYGIRAALVAEPTDALKITYGIDADMDSFTARQNIFDMVAA GQSGGLDFNTIGKTGLYPSIDVSTVAGFAEASYEATDRLTLNGGVRYQFVNTEVSDFIGAAQQVAILQGRATSADTIPGG EVNYDAALFSAGATYQLTNTQQVYANFSQGFELPDPAKYYGIGNYSFSGGHYTLVNSVNVGDSALEAIKTNSFEIGYRLD DGTFNLETAAYYSLSDRSINLNRSSLAVEIIDRERRVYGIEGKAGVKLDHGFDVGVLGHWVRTEVKGADGWEKDSVGSAS VSKLGGYVGWTNDALSLRFSGQHIFELTDAQNFTIDDYTLFDLTGGYRFENTDTTLNFGIHNVFDTDYTTVWGSRAKALY GGLADESVFDYKGRGRTFAVSLTKVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iutA | AAK71635.1 | IutA | Virulence | SHI-3 | Protein | 1e-117 | 42 |
| iutA | NP_709458.2 | ferric siderophore receptor | Virulence | SHI-2 | Protein | 1e-116 | 41 |
| iutA | NP_839219.1 | ferric siderophore receptor | Virulence | SHI-2 | Protein | 1e-116 | 41 |
| iutA | AAD44750.1 | IutA | Virulence | SHI-2 | Protein | 2e-116 | 41 |
| iutA | YP_002414042.1 | Ferric aerobactin receptor | Virulence | Not named | Protein | 2e-116 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rhtA | NP_436511.1 | RhtA rhizobactin receptor precursor | VFG1085 | Protein | 6e-118 | 42 |
| rhtA | NP_436511.1 | RhtA rhizobactin receptor precursor | VFG0619 | Protein | 5e-117 | 41 |
| rhtA | NP_436511.1 | RhtA rhizobactin receptor precursor | VFG0936 | Protein | 8e-117 | 41 |
