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Name : gabD5 (SMa1848) Accession : NP_436263.1 Strain : Genome accession: NC_003037 Putative virulence/resistance : Unknown Product : GabD5 succinate semialdehyde dehdyrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1047688 - 1049142 bp Length : 1455 bp Strand : + Note : glimmer prediction. Strong similarity to LOCUS GABD_ECOLI 482 aa SUCCINATE-SEMIALDEHYDE [NADP+] (SSDH). ACCESSION P25526. Similar to Aldehyde family. May be in an operon with SMa1844 and SMa1846 DNA sequence : ATGAGATTGAAGGACAGGGAACTCTTCCGGCAATTGGGCCTGATCGGCGGTGAGTGGATCGCCGGAGCTTCGGGCGTGGT CGTCGACGTCATCGATCCTGCGAACCAGGCCGTTCTCGGCACCGTGCCCGACATGGGAACGGCCGAAACCCGCGCGGCCA TCGAAGCGGCCAATGCCGCCTTCGGACCTTGGAAGAAGAAAACGCACGCCGAACGCGCCGCCGTGCTCGAGCGCTGGCAC GCGCTGATGATCGAAAACCTCGAAGATCTGGCGGTGCTCGTGACGATGGAACAGGGCAAGCCGCTCGAGGAGGCGCGAGG CGAGATCCGCTACGGCGCCGCCTTTGTCAAATGGTTCGCGGAAGAATCCCGCCGCATCGGCGGCCACACCATTCCCTCCC CGACGTCGGACCGCCGCATCGTCGTGCTGAAGGAAGCGGTCGGCGTCTGCGCCATCGTCACGCCGTGGAATTTCCCCAAC GCGATGATCACCCGGAAGGTCGCCCCGGCGCTCGCCGCCGGCTGCACGGTGGTCATCAAGCCCTCGGAGTTCACGCCCTT CTCGGCGCTCGCCCTCGGCGTGCTCGCCGAGCGCGCCGGCATTCCGGCCGGTGTCGTCAATATCGTCACGGGCATGCCGA CGGCGATCGGTAACGAGTTCATGACGAACGAGACGGTACGCAAGATCTCCTTCACCGGCTCGACCCGCGTCGGTTCGCTG CTGATGCGCGGCGCTGCAGACAGCGTCAAGCGGCTCTCGCTCGAACTCGGCGGCAATGCCCCCTTCATCGTTTTCGACGA CGCCAATCTCGATCTTGCGGTGGAAGGCGCGATCGCGTCGAAGTTCCGCAATGGCGGGCAGACCTGCGTCTGCGCCAACC GAATTCTCGTGCAGGCCGGTGTCTATGACGCCTTCGCCGAGAAGCTCGGCGCCCGCGTCAACGCGATGAAGGTAGGCCCG GGGACAGAGCCCGGCATCGCAATTGGCCCGATGATCAATGAGGCTGCGATCGACAAGATCGACCGCCACGTCGAAGACGC GATTGCCAAGGGCGCAAAGCTGGCGGCGCGTGGCAGGTCGGTGCCGGAGGGCCGGCAATATACGGCCCCGATTGTGCTCA CCGGCGCCACCACGGACATGCTGCTCGCCAGCGAGGAAACCTTCGGTCCCGTTGCCCCGCTCTTCCGCTTCGAGACCGAA GACGAGGCGATCGCCATCGCCAACGGCACGCCCTTTGGGCTGGCCGCTTATTTCTACACCGAAGGCCTGAAGCGCTCCTG GCGGGTGGCGGAAGCACTGGAGTTTGGCATGATCGGCCTCAACACCGGCGCCATCTCGACCGAAGTCGCGCCCTTCGGCG GCGTCAAGCAATCCGGCCTCGGACGCGAGGGCGCCCAGGTCGGCATCGAAGAATATCTCGAGATGAAGAGCTTCCACATC GGGGGGCTGGACTAG Protein sequence : MRLKDRELFRQLGLIGGEWIAGASGVVVDVIDPANQAVLGTVPDMGTAETRAAIEAANAAFGPWKKKTHAERAAVLERWH ALMIENLEDLAVLVTMEQGKPLEEARGEIRYGAAFVKWFAEESRRIGGHTIPSPTSDRRIVVLKEAVGVCAIVTPWNFPN AMITRKVAPALAAGCTVVIKPSEFTPFSALALGVLAERAGIPAGVVNIVTGMPTAIGNEFMTNETVRKISFTGSTRVGSL LMRGAADSVKRLSLELGGNAPFIVFDDANLDLAVEGAIASKFRNGGQTCVCANRILVQAGVYDAFAEKLGARVNAMKVGP GTEPGIAIGPMINEAAIDKIDRHVEDAIAKGAKLAARGRSVPEGRQYTAPIVLTGATTDMLLASEETFGPVAPLFRFETE DEAIAIANGTPFGLAAYFYTEGLKRSWRVAEALEFGMIGLNTGAISTEVAPFGGVKQSGLGREGAQVGIEEYLEMKSFHI GGLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-129 | 57 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-79 | 41 |
