Gene Information

Name : ssb (CA_C3723)
Accession : NP_350303.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3928639 - 3929073 bp
Length : 435 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAGGTTGTTTTAATAGGAAGATTAACTAAGGATCCAGAGTTAAAGTTTACTCCCGGTACAGGAACAGCCGTTGC
ATCATTTACTTTGGCTGTAGATAGAAGATTTAAAAAAGAGGGTCAGCAGGAAGCTGATTTTATTCCCATAGTTGTATGGG
GAAAACAAGCTGAATCTACGGCTAATTACATGAGTAAAGGAAAACTTATGGGAGTTAGCGGAAGAATACAGACTAGATCT
TATGATGCTAAGGATGGTACTAGAAGGTACGTAACTGAAATTGTAGCTGAAGAAGTTCAATTTCTTGAATGGGGATCTTC
TAATAATAACTCCATGGCAAATGATCAATTTAATAATGGAAATGAAAATGGTTCAATGCAATTACCAGATAATAATGATA
TAACACCAATAGATGATGGAGATATCCCATTTTAA

Protein sequence :
MNKVVLIGRLTKDPELKFTPGTGTAVASFTLAVDRRFKKEGQQEADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRS
YDAKDGTRRYVTEIVAEEVQFLEWGSSNNNSMANDQFNNGNENGSMQLPDNNDITPIDDGDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 4e-28 63
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 6e-28 63
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-27 61
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 4e-27 58
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-25 57
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 1e-23 56
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 5e-21 50
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 7e-21 50
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 2e-27 47
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 1e-27 47
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-29 45
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-29 45
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 6e-29 44
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 6e-29 44
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 6e-29 44
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-29 44