Gene Information

Name : dnaC (CA_C3715)
Accession : NP_350295.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 3920086 - 3921414 bp
Length : 1329 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGGAGGCACCCTTAAGAGCTATGCCTCAAAACCTGGAGGCAGAACAGAGTGTTTTAGGTTCCATGATAAGCGATAAAAA
CTGTATAGCACAAGCAGCTGAATCCCTAAGAGGAGAGGATTTTTATCGCCAGAATCATCAAATTATTTTTAATGCTATGT
TAGAACTTTTCCAAAAGGATATACCAGTAGACTTGATAACACTTTTAGAGCATTTAAAATCTACGGATAAGCTTGAAGCT
TCAGGTGGAATAACATACGTAACTCAAATCAGGGATTCCATAGCATCTACTGCAAACATTCAATCTTATATAAAAATAGT
TAAAGATAAGGCAGTGTTAAGAAAACTTATAAAATCTTCAACGGATATAATTGAAGAAAGTTATTCTAAGCAGGATGATG
TAGAGAAGGTACTAGACAGTGCGGAAAAAAGAATATTTGATATAGCAGAAAATAAAGTTACAAGTGATTTTGAAGCAATG
AATGTTGTACTTGAGCGTGGTTTTGAACAGATAGAGAAACTTTATAACAACAAAGGGGAAATAACAGGGATTCCGTCTGG
TTTTCCTGAATTAGATGATAAAACATCAGGATTTCAAAAGGGAGATATGGTTCTTATTGCAGCAAGACCTTCAATGGGAA
AAACTACATTTGCTCTTAATATAGCAGAGTATGCAGCATTAAGGGCAGGCAAGAGCGTAGTAATATTTTCTCTAGAAATG
TCAAAGGAGCAGCTTGCATACAAGTTACTATGCTCAGAAGCTAATGTTGATATGTTAAAGCTTAGAACAGGAAATCTTGA
AGATGAAGATTGGGATAATATTGCTAGAGCATCAGGACCGCTTGCAGATGCCAAGATTTTTATTGATGATACTGCTGGAG
TTAGCGTAATGGAAATGAGGTCTAAATGCAGAAGATTAAAAATAGAGCATGGTATAGATCTTATAGTAATTGACTACTTG
CAGCTTATGAGTGGAAATGGAGAAAGCAGACAGCAAGAGGTATCTGAGATATCAAGATCTATAAAGGCACTTGCAAAGGA
GATAGGGTGTCCAGTTATTGCTCTTTCACAGTTATCGCGTGCTCCTGAGCAAAGAAATGATCACAGACCTATGCTTTCGG
ACTTAAGAGAATCTGGTTCTATAGAGCAGGATGCCGATCTTGTTATGTTCCTTTATAGAGATGAATATTACAATAAGGAA
ACTGAACAAAAGAATGTTGCAGAATGCATAATAGCAAAACAGAGAAATGGTCCTACAGGAACTGTTAATCTTGCTTGGCT
TGGTCAGTACAGTAAGTTTGGTAGGTTAGATGTAATTCATCAAGAATAA

Protein sequence :
MEAPLRAMPQNLEAEQSVLGSMISDKNCIAQAAESLRGEDFYRQNHQIIFNAMLELFQKDIPVDLITLLEHLKSTDKLEA
SGGITYVTQIRDSIASTANIQSYIKIVKDKAVLRKLIKSSTDIIEESYSKQDDVEKVLDSAEKRIFDIAENKVTSDFEAM
NVVLERGFEQIEKLYNNKGEITGIPSGFPELDDKTSGFQKGDMVLIAARPSMGKTTFALNIAEYAALRAGKSVVIFSLEM
SKEQLAYKLLCSEANVDMLKLRTGNLEDEDWDNIARASGPLADAKIFIDDTAGVSVMEMRSKCRRLKIEHGIDLIVIDYL
QLMSGNGESRQQEVSEISRSIKALAKEIGCPVIALSQLSRAPEQRNDHRPMLSDLRESGSIEQDADLVMFLYRDEYYNKE
TEQKNVAECIIAKQRNGPTGTVNLAWLGQYSKFGRLDVIHQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-77 45
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-82 43
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 9e-78 43
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-78 43
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-72 43
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-72 43
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-75 41