Gene Information

Name : CA_C3616 (CA_C3616)
Accession : NP_350199.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3819519 - 3820211 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGGACATTATTAAACTAAAAAATGTATCTAAAATATATACTGATGGTGATAATAAGTTATATGCATTAAGTGATATTAC
TTTATCAATCCAAGAAGGAGAAATGCTAGCAGTGATGGGTGCATCTGGCTCAGGTAAATCAACATTGTTAAATATATTAG
GATGTATTGATTCATTAACAGAAGGCGAATATTATTTTAAGAACAATTTAGTTAATAGTAAAAAAAGCGTTGAATTATCA
AAGTTAAGAAGAAACGATATAGGATTTATATTTCAAAATTATTCACTAATACAAAAATATAATGTTGTTGAGAATGTTAT
GCTATCTCTTCAATATAAAAATCTTTCTACTCATAATCGCATAAGCAAAAAAGAAATAAAAAATAAGGCGATAAAAACTC
TTATAGATTTAGGCCTTAAAGAGAAACTTTATAAGTTGCCATCAAATTTATCTGGTGGTGAACAACAAAGAGTAGCAATA
GCTAGGGCATTGGTTGGTGATAAAAGAGTAATACTAGCAGATGAACCGACTGGAGCTTTAGATAAAAAGAATGGACAGCA
ACTAATTAATATTTTAAAAAAAGTAAATGAACTAGGTGTTACGCTTGTTATTGTAACTCACGATAAAACTGTAGCAAATA
AATGTACAAGGACTATCTATATTGAAGATGGAAAAGTTGTTAATAGTATTTAA

Protein sequence : 
MDIIKLKNVSKIYTDGDNKLYALSDITLSIQEGEMLAVMGASGSGKSTLLNILGCIDSLTEGEYYFKNNLVNSKKSVELS
KLRRNDIGFIFQNYSLIQKYNVVENVMLSLQYKNLSTHNRISKKEIKNKAIKTLIDLGLKEKLYKLPSNLSGGEQQRVAI
ARALVGDKRVILADEPTGALDKKNGQQLINILKKVNELGVTLVIVTHDKTVANKCTRTIYIEDGKVVNSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-30 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA_C3616 NP_350199.1 ABC transporter ATPase NC_012469.1.7686878. Protein 3e-40 45
CA_C3616 NP_350199.1 ABC transporter ATPase NC_012469.1.7686946. Protein 1e-25 43
CA_C3616 NP_350199.1 ABC transporter ATPase CP001581.1.gene598.p Protein 3e-34 41
CA_C3616 NP_350199.1 ABC transporter ATPase CP001581.1.gene798.p Protein 3e-35 41
CA_C3616 NP_350199.1 ABC transporter ATPase NC_008702.1.4606598. Protein 6e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA_C3616 NP_350199.1 ABC transporter ATPase VFG0869 Protein 2e-16 41