Gene Information

Name : CA_C3560 (CA_C3560)
Accession : NP_350144.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3756869 - 3757570 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGAGTTAGCAAGAGAAGAGGCTAAAAGCGTAATAGAAGCAAGAGGTTTAAATAAAATATTTAAACTTGGCAAAAT
GGATGTAGAGGTGCTCAAAGATATAAATATAGATATAAAAGAGGGAGAGTTTGTATCTATAATGGGACCATCAGGATCAG
GGAAAAGTACTCTTTTGTACCTGCTTGGCGGACTTGATAAACCCACATCAGGTAGCGTTAAAATAGCAGGAAAAGAACTC
TCAACTATGAATGATAAAGAACAGAGTATAATGAGAAGACGAGATGTTGGTTTTGTATTTCAATTTTATAATTTGATACC
TAATCTTAATGTGGAAGAAAACATTATGCTTCCAATACTTCTGGATGGAAAGAAAATAAAAAATTATAGAGATAAACTAG
AAAATATATTAAAGATAGTTGGACTTGAAGAGAGAAGGAAACATACTCCAAGAGAGCTGTCGGGAGGACAACAGCAGAGG
GTTGCTATAGCTAGGGCACTTATAAATGAACCAGATGTAATACTTGCAGATGAACCAATAGGAAATCTTGATAGTAAAAC
AGGAACGGAAGTAATGGAACTAATGAGAAAAATAAATATAGAAGAAGGAAAGACCATAGTACAGGTTACTCACTCTTCAG
AGGCAGCAAAGTATGGACAGAGAATAATATATGTTAAGGATGGAAAGGTGGTAGAACAATAA

Protein sequence : 
MEELAREEAKSVIEARGLNKIFKLGKMDVEVLKDINIDIKEGEFVSIMGPSGSGKSTLLYLLGGLDKPTSGSVKIAGKEL
STMNDKEQSIMRRRDVGFVFQFYNLIPNLNVEENIMLPILLDGKKIKNYRDKLENILKIVGLEERRKHTPRELSGGQQQR
VAIARALINEPDVILADEPIGNLDSKTGTEVMELMRKINIEEGKTIVQVTHSSEAAKYGQRIIYVKDGKVVEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-39 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-28 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA_C3560 NP_350144.1 ABC transporter ATPase CP001581.1.gene598.p Protein 1e-48 52
CA_C3560 NP_350144.1 ABC transporter ATPase CP001581.1.gene798.p Protein 3e-48 50
CA_C3560 NP_350144.1 ABC transporter ATPase NC_012469.1.7686878. Protein 2e-45 48
CA_C3560 NP_350144.1 ABC transporter ATPase NC_008702.1.4606598. Protein 1e-42 47