Gene Information

Name : CA_C0319 (CA_C0319)
Accession : NP_346960.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 373670 - 374356 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTTTATCAATTCAAATAAAAAATTTAGGTAAGACTTATAAAATGGGAAGAAATGAGTATATAGCCTTGAGTAACAT
TAACTTAGAAATTTCAAAGGGTGAATTTGTATCCATTGTAGGTCCATCAGGAGCAGGAAAGTCAACGCTTATGAATATTA
TAGGATGTCTTGATAATGCAACAGAAGGAGAATACTTATTAGATGGTGTTAGCACAAATTGTAATGATAATAAGTTGGCA
GAAATAAGGAATAAAAAAATAGGTTTTATATTTCAAAATTATAATTTGCTGCCTAAACTAAGTGTTAGAGAAAATGTAGA
ACTTCCCCTTGTATATCAAGGATTAAATTCAAATGAAATAAAATATAGAGCTCACGAAGTTATAAAAAAGGTTGGACTTG
AAGAACACCTAAATCATAAACCGTCAGAATTATCGGGAGGACAAAAGCAGAGAGTTGCAATTGCTAGAGCGTTAGCTTCT
AAACCTGAAATAATATTGGCGGATGAACCTACTGGGGCATTAGATAGTAAAACGGGAAAAGAAGTTATAGAAATGATTAA
AGAAATTAATGAAGATGGAAATACGGTTGTTTTAATAACTCATGATATGCAAATAGCAAAAGAAGCCAAGAGAATAGTTA
CAGTTAAGGATGGAAAAATAATTTCGGATAAATATAATACCAAGTAA

Protein sequence : 
MPLSIQIKNLGKTYKMGRNEYIALSNINLEISKGEFVSIVGPSGAGKSTLMNIIGCLDNATEGEYLLDGVSTNCNDNKLA
EIRNKKIGFIFQNYNLLPKLSVRENVELPLVYQGLNSNEIKYRAHEVIKKVGLEEHLNHKPSELSGGQKQRVAIARALAS
KPEIILADEPTGALDSKTGKEVIEMIKEINEDGNTVVLITHDMQIAKEAKRIVTVKDGKIISDKYNTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-35 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA_C0319 NP_346960.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-53 53
CA_C0319 NP_346960.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-40 48
CA_C0319 NP_346960.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-40 47
CA_C0319 NP_346960.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-44 43
CA_C0319 NP_346960.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 6e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA_C0319 NP_346960.1 ABC transporter ATP-binding protein VFG0869 Protein 3e-27 45