Gene Information

Name : CA_C3438 (CA_C3438)
Accession : NP_350028.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Resistance
Product : BlaI/MecI subfamily transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3682
EC number : -
Position : 3629174 - 3629548 bp
Length : 375 bp
Strand : -
Note : -

DNA sequence :
TTGAAAAGTCCAGTTAAAATATCAGATGCTGAATGGAGTGTTATGCAAGCCTTATGGAAACATTATCCTGCTACTTTTTC
TGAAATTGTAGAAGGGCTTAATGAGGAGTGTGAGTGGAGTCCAAAGACAGTTCATACACTTATATCTAGGCTTGTAAAAA
AGGGTGTCGTTAGTACAATAAAAGATACGAAACATTACAAGTACTCACCATTAGTCACAGAAGATGAGATGATGAATTTA
GAAACAGAATCATTTATAAATAAAATATACCACGGTTCTGTTAACTTGTTTGTTTCAAATTTTTTGAAAAAACAAAAGCT
AAATAAAAACGAGATATTAGAATTAAAAAAAATACTAGATGAAAATATGAAGTAG

Protein sequence :
MKSPVKISDAEWSVMQALWKHYPATFSEIVEGLNEECEWSPKTVHTLISRLVKKGVVSTIKDTKHYKYSPLVTEDEMMNL
ETESFINKIYHGSVNLFVSNFLKKQKLNKNEILELKKILDENMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_039517.1 methicillin resistance regulatory protein MecI Not tested Type-II SCCmec Protein 2e-15 44
mecI NP_373280.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 1e-15 44
mecI YP_190060.1 methicillin-resistance regulatory protein MecI Not tested Type-II SCCmec Protein 1e-15 44
mecI BAA82218.1 methicillin resistance protein MecI Not tested Type-II SCCmec Protein 1e-15 44
mecI NP_370567.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 5e-15 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA_C3438 NP_350028.1 BlaI/MecI subfamily transcriptional regulator NC_002952.2861158.p0 Protein 5e-16 44
CA_C3438 NP_350028.1 BlaI/MecI subfamily transcriptional regulator AM180355.1.gene595.p Protein 4e-18 44
CA_C3438 NP_350028.1 BlaI/MecI subfamily transcriptional regulator NC_002745.1122814.p0 Protein 5e-16 44
CA_C3438 NP_350028.1 BlaI/MecI subfamily transcriptional regulator NC_009782.5560220.p0 Protein 2e-15 43
CA_C3438 NP_350028.1 BlaI/MecI subfamily transcriptional regulator NC_002758.1120003.p0 Protein 2e-15 43
CA_C3438 NP_350028.1 BlaI/MecI subfamily transcriptional regulator CP001581.1.gene771.p Protein 1e-17 42