Gene Information

Name : CA_C3040 (CA_C3040)
Accession : NP_349640.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Virulence
Product : CPSC/CAPB subfamily ATPase
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 3189808 - 3190506 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGTTGATTGTTAAGGATAATCCTAAATCTCCAGTAGCAGAATCTTATAGAACCTTAAGAAGTAACATTCAGTTTTCAAG
TTTCGATGAAGAAATTAGAGTTATACTGGTTACAAGTTCAGGGCCAGGTGAAGGAAAATCAACTACGGCAGCTAATTTAG
CACTTGCCATGGCTGAAACAGGAAATCAAGTTTTAATTGTTGACTGCGATTTAAGAAAACCAAGCATACACAAAAAATTT
AAATTATCTAATAGTTCTGGTTTATCAAACATAATAGCGGGACAAGCTAAGTTTGAAGATTCGGCTCATTATTTTAATAA
GAAACTTTGTGTTTTAACCTCTGGTAAAATACCACCTAATCCTGCAGAAATGCTTGCATCACATAAAATGAAAGAATTCT
TAAATGAATCAAAAGGAGTATTTAAATATATAATACTTGATACTCCTCCTATAATAGCAGTAACGGACCCTCAAATTCTT
TCTACTATGGTAGATGGTGTGATTTTAGTTGTAAGTTCTGGGGTGGCTGAAATAGAAGCAGCTAAAAGAGCTAAAGAACT
TTTAGAAAATGTAAATGCCAACATACTTGGAACAGTTCTTAACAAGGTAAAAGTAGGTAGTAGAGGTTATTACAGTTATT
ATGGCAACGAAGGTAAAAGGGGAAAGAGGCGTAAAAGAAAAAGGAAACTGTTTAAGTAG

Protein sequence : 
MLIVKDNPKSPVAESYRTLRSNIQFSSFDEEIRVILVTSSGPGEGKSTTAANLALAMAETGNQVLIVDCDLRKPSIHKKF
KLSNSSGLSNIIAGQAKFEDSAHYFNKKLCVLTSGKIPPNPAEMLASHKMKEFLNESKGVFKYIILDTPPIIAVTDPQIL
STMVDGVILVVSSGVAEIEAAKRAKELLENVNANILGTVLNKVKVGSRGYYSYYGNEGKRGKRRKRKRKLFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-37 41
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA_C3040 NP_349640.1 CPSC/CAPB subfamily ATPase VFG1298 Protein 7e-37 41