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Name : secA (CA_C2846) Accession : NP_349450.1 Strain : Clostridium acetobutylicum ATCC 824 Genome accession: NC_003030 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 2977874 - 2980393 bp Length : 2520 bp Strand : - Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGGGACTGTTAGAGAAAATATTTGGTACATATAGTGATAGAGAAGTGAAAAGGATTATTCCTCTTGTTGATAAAATAGA TGCACTAGATGGATCAATGCAAGCTTTAAGTGAGGATGAACTTAAAGCTAAAACTGCTGAATTTAAGCAGAGGTATGAAA ATGGGGAAACACTTGATGATTTACTTGTTGAAGCATTTGCGGTGGTAAGAGAAGCTTCATCAAGAATTCTTGGCTTAAAG CATTTTAGAGAGCAAATTATAGGTGGTATTGTACTTCATCAGGGAAGAATTTCAGAGATGAAAACCGGTGAAGGTAAAAC ATTAGTTGCAACACTTCCGTCATATTTGAATGCAATTACAGGTAAGGGAGTTCATGTAGTAACAGTAAATGATTACCTTG CAAAAAGAGATATGGAATGGATGGGACAGCTTTATCAATATCTTGGATTAACTACAGGGGTAATAGTTCATGATCTTGAT CAAAAACAAAGACAGGAAGCTTATGCAGCAGATATAACCTACGGTACAAATAACGAGTTTGGATTTGATTATTTAAGAGA TAACATGGTTATATATAAGGAAGAAAGAGTTCAAAGACCACTTCACTTTTGTATAGTTGACGAGGTGGACTCAATCTTAA TAGATGAGGCAAGAACACCACTTATAATATCCGGAGAAGGAGAAAAATCCACTGAATTTTACAAGGTGGCTGACAACTTC GCTAAGATGTTAAGGAAAGAAAAAGATTTTACTATTGATGAAAAAACTAATTCAGCAATACTAACAGATGAGGGTGTTGA AAAGGCAGAAAAATATTATCATATTGACAACTATGCAGATCCACAAAACATGGAAATACAACATCATACATCTCAGGCAT TAAAGGCAAATTATTTAATGAAACGTGATAAAGATTATATGGTAAAGGAAGATGAAGTAGTAATTGTAGACGAATTTACC GGAAGACTTATGGAAGGTAGAAGATACAGTGATGGACTTCATCAAGCAATAGAAGCAAAAGAAGGTGTTAAGGTTCAAAA AGAATCTAAGACACTTGCTACAATAACTTTCCAGAATTATTTTAGAATGTATGAAAAACTTTCTGGTATGACAGGTACTG CATTAACAGAGGAAGTGGAGTTCAGAGAAATATATGGTCTTGACGTTGTTGTAATACCAACTCACAGACCTATAGCTAGA ATAGATGCACCGGATATTGTATATAAGACTGAACTAGGAAAGTTTAAGGCAGTAGTTGAAGATATAGTAGAAACAAATAA AAATGGGCAGCCTGTACTTGTTGGTACTGTAAGTATAGAAAAATCAGAACTTCTGTCATCATTGCTTAAAAAAAGAGGAG TACGTCATCAGGTTTTAAATGCTAAGTATCATGAGCAAGAAGCAGAAATAATTTCACATGCAGGAGAAAAAGGCATGGTT ACTATAGCAACTAATATGGCAGGACGTGGTACCGATATAAAGCTTGGAGAAGGAGTTACTGATGTAGGCGGTCTTAAGAT AATAGGTACTGAAAGACATGAATCAAGACGTATAGATAATCAGCTTAGAGGTCGTGCTGGTCGTCAAGGAGATAAGGGAT ATTCAAGATTTTATGTTTCACTGGAAGACGATCTTATGAGAATATTTGGTTCCGATAAGCTTAAAAACATGGTTGAAAAA TTAGGTCTTGGAGACGACGATGCAATAGAAAGTAAGATGGTAAGTTCGGCTATAGAGAATGCTCAAAAGAAGGTTGAAGG AAACAATTTTGACATAAGAAAAACTCTTATTCAGTACGATGATGTAATGAATAAACAGAGAGAAATCATCTACAAACAGA GAAGTGAGGTTCTAGAAGGTGAAAACCTAAAGGATCAAATAGAAGGAATGATAAAAGACCTTATTTATAACGCTGTTAAT TCACACATAAGTGGAGTAGATGAAGAGCTTGAATCAGATATCGAAGCAATTCTAAATTACCTTGATGATATATGTCTTCC TAGAGGTATAGTTGAGGTTGAAGAACTTGCTACTATGTCAAATGATGAAATTAAAGAAAAGCTTTATTCTTTAGCTAAGG AAATATATGAAAGAAAAGAAGAAGAGTTTTCTAGCGATCAAATGAGAGAACTTGAAAGAGTAATATTACTTAGAGTGGTT GATACAAAGTGGATGGATCATATCGATAGTATGGAACACTTGAAACAAGGAATAGGACTTAGAGCATATAAGCAGCAGGA TCCTACTCAAGCATATCAGATGGAAGGAAGCGATATGTTTGAAGAGATGGTAGAGAACATAAAAGTAGAAACCGTTAGGT ATCTATTCCATGTTCAAGCTGAAAGAGCTCCTGAAAGACAGAGAGTTGTTAAAGAAACAGAGATAAATTACAGTGGACCA GATGCTGGAGATACTAAGAAAGAGCCTGTAAGAAGAAAAGAAAAGAAGATAGGAAGAAACGATTTATGTCCTTGTGGCTC TGGTAAAAAGTATAAGGATTGTTGTGGAAGAAGAGCATAA Protein sequence : MGLLEKIFGTYSDREVKRIIPLVDKIDALDGSMQALSEDELKAKTAEFKQRYENGETLDDLLVEAFAVVREASSRILGLK HFREQIIGGIVLHQGRISEMKTGEGKTLVATLPSYLNAITGKGVHVVTVNDYLAKRDMEWMGQLYQYLGLTTGVIVHDLD QKQRQEAYAADITYGTNNEFGFDYLRDNMVIYKEERVQRPLHFCIVDEVDSILIDEARTPLIISGEGEKSTEFYKVADNF AKMLRKEKDFTIDEKTNSAILTDEGVEKAEKYYHIDNYADPQNMEIQHHTSQALKANYLMKRDKDYMVKEDEVVIVDEFT GRLMEGRRYSDGLHQAIEAKEGVKVQKESKTLATITFQNYFRMYEKLSGMTGTALTEEVEFREIYGLDVVVIPTHRPIAR IDAPDIVYKTELGKFKAVVEDIVETNKNGQPVLVGTVSIEKSELLSSLLKKRGVRHQVLNAKYHEQEAEIISHAGEKGMV TIATNMAGRGTDIKLGEGVTDVGGLKIIGTERHESRRIDNQLRGRAGRQGDKGYSRFYVSLEDDLMRIFGSDKLKNMVEK LGLGDDDAIESKMVSSAIENAQKKVEGNNFDIRKTLIQYDDVMNKQREIIYKQRSEVLEGENLKDQIEGMIKDLIYNAVN SHISGVDEELESDIEAILNYLDDICLPRGIVEVEELATMSNDEIKEKLYSLAKEIYERKEEEFSSDQMRELERVILLRVV DTKWMDHIDSMEHLKQGIGLRAYKQQDPTQAYQMEGSDMFEEMVENIKVETVRYLFHVQAERAPERQRVVKETEINYSGP DAGDTKKEPVRRKEKKIGRNDLCPCGSGKKYKDCCGRRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 1e-135 | 42 |
