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Name : CA_C2105 (CA_C2105) Accession : NP_348724.1 Strain : Clostridium acetobutylicum ATCC 824 Genome accession: NC_003030 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2198318 - 2199793 bp Length : 1476 bp Strand : - Note : - DNA sequence : GTGAGTGAATTAAAAATTGTAGATTTAGATGAATGTGACATAAATAAGGAAAAGCTTATAGCAGCTATAGATATGAAGTC AATTTGCAGCTATAATGTATTTCCATTTTATTTTGATGAAAGTAAGGTTTGTGTTGCCTCCTTTGGGAAGGTATCTAAGG AGATTATAAAGGATTTAAAATTTTTATTAAGAAAAGAGATTTTTGTATACAAGGGGTATAAAGAGCAAATTGAAAAATAC ATAAAGATATATACTAGTTTGGAATTGGGTCATAAGGCTATAAATGATATGAAAAAAGAAGAAGAAAATCAGAAACTCTA TGAGGTTAAAAAGGCTAAGAGTTATTCTCCATCAGTACTTCTTGTTGATTCAATAATTGACTTAGCACTTAGTAAAAATG GAAGTGATATACACATAGAACCTTTTAAAGATATTGCGGTTGTGAGGATAAGAATTGATGGTGTTTTAAAAAAGGTAATG GAGCTACCCCTTAAGGCATATGAATCTGTTTGTATAAGAATAAAAATAATGGCTGACATGAATATTGTTATAAAAAAAGC TCCACAGGATGGAAGAATGTACTACAAAAATTGTGATTTTAGAGTTTCCAGTATACCTACTATTTTTGGAGAAAAAATTG TAATAAGGGTACTATATAAAAATAATGCAGCCTTAAGTTTTAGTGACATAACAGGAGTAAATGAAAATGAAGTCGCGGGT TTGCTTGAAAAACCTAATGGTATAGTACTTCTGACTGGTCCAACTGGCAGTGGGAAGAGTACTACCCTATATTCAGCAAT ATCAAAGCTTAATTCAGAAGAAAAGAATATAGTTACTATAGAAGATCCAGTAGAAATGATTATAGAGGGTATAAATCAAA TTAACGTAAATTATGAAGCTGGGATTACATTTTCATCAGGTCTTAAAAATATATTAAGGCAGGACCCAGATATTATAATG GTTGGGGAAATAAGAGATGAAACTACAGCTGAAATAGCAGTTAGAGCTGCTATAACTGGACATCTTGTACTTAGTACTCT GCATACTAACGATGCCTTTTCTGCAATTAATAGATTGTGTGATATGGGAATTCAAAAATATCTTATACTAGATGCATTAA ATGGTGTTATAGCTCAGAGACTCCTTAGAACTATTTGCGTACATTGTAAAGAGGAATATAAACCTAATGACTATGAAAGA AAGGTTTTAGGACTTAATTCAAGTGAGGTTTTGTATAAAGGCAGAGGCTGCAGCAAGTGTGATTTTTCAGGATACCATGG AAGAAAGGCTGTGTTTGAGATTATATCAATAAACGATGATGTAAGAGATATAATAGCGGAATCTAAAGGAGCTGATTGTA TAAAAAGATACTTTATACAGTCTGGTGTGAAAACATTAAAAAAAAGTGGAATGGAATTAGTTAAAAGAGGAGAAACCACC TTTAGCGAATTTAAGAGAGTAATTTATAATATTTAA Protein sequence : MSELKIVDLDECDINKEKLIAAIDMKSICSYNVFPFYFDESKVCVASFGKVSKEIIKDLKFLLRKEIFVYKGYKEQIEKY IKIYTSLELGHKAINDMKKEEENQKLYEVKKAKSYSPSVLLVDSIIDLALSKNGSDIHIEPFKDIAVVRIRIDGVLKKVM ELPLKAYESVCIRIKIMADMNIVIKKAPQDGRMYYKNCDFRVSSIPTIFGEKIVIRVLYKNNAALSFSDITGVNENEVAG LLEKPNGIVLLTGPTGSGKSTTLYSAISKLNSEEKNIVTIEDPVEMIIEGINQINVNYEAGITFSSGLKNILRQDPDIIM VGEIRDETTAEIAVRAAITGHLVLSTLHTNDAFSAINRLCDMGIQKYLILDALNGVIAQRLLRTICVHCKEEYKPNDYER KVLGLNSSEVLYKGRGCSKCDFSGYHGRKAVFEIISINDDVRDIIAESKGADCIKRYFIQSGVKTLKKSGMELVKRGETT FSEFKRVIYNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-78 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-78 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CA_C2105 | NP_348724.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-78 | 45 |
| CA_C2105 | NP_348724.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-75 | 43 |
| CA_C2105 | NP_348724.1 | general secretion pathway protein E | VFG1880 | Protein | 8e-63 | 42 |
| CA_C2105 | NP_348724.1 | general secretion pathway protein E | VFG1876 | Protein | 3e-72 | 41 |
