Gene Information

Name : CA_C1998 (CA_C1998)
Accession : NP_348617.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2108414 - 2109088 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACGGCTATTGAGGTGACGAATCTATATAAAACATTTAAGAATGATAAAATTGAAACTACTATTTTGAAAAATAT
ACAAGTAACAATTAATGAAGGTGAATTTGTTTCCATAATGGGACCATCAGGTTCTGGAAAAAGTACGCTTCTTTATTTAA
TCGGAGGACTTGATAAGCCAACTTCCGGAAGTATAAAAATTAAGGGGAAAGATATAGCAGTAATGAGTGATAATGAAGCG
AGTAATATGAGATGTAGGAATGTTGGATTTGTGTTCCAATTTTATAATCTGATTCCTAATTTGAGTGTTGAAGAAAATAT
ATTATTGCCAATATTATTAGAAGGTAAAAGTGAAAAACTGTATAAGGAAAAACTAGATGAGATTCTTGAGGATATAGGAT
TATCAACGAAAAGGAAGTATACTCCTAAACAATTATCAGGTGGTCAGCAGCAAAGAGTAGCCATTGCGAGAGCTTTAATC
AATGAACCTGATATTATCTTAGCAGATGAGCCTATTGGAAATTTAGATTCGAAAACAGGAAATGAAATCATGGAACTTTT
ACGTAAAATTAATAGGGAAAAGGGCAAGACAATAGTTCAGGTGACTCATTCACAAGAATCTTCAACGTATGGTAATAGAA
CGATTTTCTTAAAAGATGGTATGATACAGAATTAA

Protein sequence : 
MKTAIEVTNLYKTFKNDKIETTILKNIQVTINEGEFVSIMGPSGSGKSTLLYLIGGLDKPTSGSIKIKGKDIAVMSDNEA
SNMRCRNVGFVFQFYNLIPNLSVEENILLPILLEGKSEKLYKEKLDEILEDIGLSTKRKYTPKQLSGGQQQRVAIARALI
NEPDIILADEPIGNLDSKTGNEIMELLRKINREKGKTIVQVTHSQESSTYGNRTIFLKDGMIQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA_C1998 NP_348617.1 ABC transporter ATPase CP001581.1.gene598.p Protein 8e-43 48
CA_C1998 NP_348617.1 ABC transporter ATPase CP001581.1.gene798.p Protein 5e-44 48
CA_C1998 NP_348617.1 ABC transporter ATPase NC_012469.1.7686878. Protein 4e-47 47
CA_C1998 NP_348617.1 ABC transporter ATPase NC_008702.1.4606598. Protein 4e-40 42
CA_C1998 NP_348617.1 ABC transporter ATPase NC_012469.1.7685735. Protein 6e-37 41