|
Name : rplS (CA_C1759) Accession : NP_348385.1 Strain : Clostridium acetobutylicum ATCC 824 Genome accession: NC_003030 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1905485 - 1905829 bp Length : 345 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGTTAGATGTTATAAAAGAAATAGAAGCAGAACAAATAAGAACAGATCTTCCAAGCTTTAATGTTGGAGATACAGTTAG AATCGAAGTTAGAATCAAAGAAGGCGAGAAGGAAAGACTTCAAGCTTTTGAAGGAACTGTAATCAAAAGACAGAACGGCG GTCTTAGAGAGACTTTCACAGTAAGAAGAGTAGCATACGGAGTTGGAGTTGAAAGAACATTCCCTTTAAATGCACCTGTT ATTGCTGGTCTTAAAGTTGTAAGAAGAGGTAAAGTTAGAAGAGCTAAACTCTACTACTTAAGAGATAGAGTTGGTAAAGC TGCTAAGGTAAAAGAAATAAGATAA Protein sequence : MLDVIKEIEAEQIRTDLPSFNVGDTVRIEVRIKEGEKERLQAFEGTVIKRQNGGLRETFTVRRVAYGVGVERTFPLNAPV IAGLKVVRRGKVRRAKLYYLRDRVGKAAKVKEIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-21 | 59 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 6e-22 | 56 |
