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Name : CA_C1543 (CA_C1543) Accession : NP_348170.1 Strain : Clostridium acetobutylicum ATCC 824 Genome accession: NC_003030 Putative virulence/resistance : Resistance Product : lactate dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1052 EC number : - Position : 1687664 - 1688644 bp Length : 981 bp Strand : + Note : - DNA sequence : GTGAAAATTTTAGTATATAATCATAGAGCTGATGAAACTGAATATTTTCAAAAGTTTAAAGAAAAATACAATGTTGATTT AATGCTTACAGACAAGACACCGACCATTGAAACTGCTGATTTTGCAAAAGGATTTGACTGCATAAGTATTATTACAACTC CAATTAATGCAGCGCTTATTAAAAAGTTTAACGACGTTGGAGTTAAATTTATATCCACTAGAACTATAGGGTATGACCAC ATAGATATTAAAAAAGCTAAAGAGCTCAGAATTGGTGTAGGAAACGTAACATATTCACCAAGAAGCGTAGCTGATTATAC TGTAATGATGATTTTAATGGCAACAAGAAAAGTAAAAGCAATTATGCAGAATAGCTATGTTCAAGATTATTCTCTAGAAG GTATTCAGGGAAAAGAATTACATAATTTAACCGTAGGAGTTATAGGAACAGGGAAGATTGGGAGAACAGTAATTAAAAAT TTAAAGGGTTTTGAATGCAACATTATAGCCTATGATATCAATGAAAATGAAGAAGTTAAAGCCCATGCTAAATATGTGAA ATTAGAAGAACTTTTAATGAGTAGTGATGTTATCACAGTGCATGTTCCAGGAGCGGAAGATAACTACCATCTAATAAATA AAAATTCCATATCAAAAATGAAAGATGGGGTATTTATTATAAATACAGCAAGAGGGTCAATTATAAACACATATGATTTT ATTGACGCTGTTGAAAAAGGGAAAATTGGTGGAGCAGCATTAGATGTAATAGAAAATGAAACAAATCTCTACTATAAAAA TCTTAAAGGAGAAGTGTTAGGAAATAGAGAATTAGCTGTTTTAAAGTCTTATCCTAATGTGATTATTACACCTCATACAG CATTCTATACAGATCAAGCAGTTAGCGATATGGTTGAGAATTCTATACTAAGTTGTATAGCTTTTTATGAGGGAAAAGAA AATCCTTGGAAAGTGTTATAA Protein sequence : MKILVYNHRADETEYFQKFKEKYNVDLMLTDKTPTIETADFAKGFDCISIITTPINAALIKKFNDVGVKFISTRTIGYDH IDIKKAKELRIGVGNVTYSPRSVADYTVMMILMATRKVKAIMQNSYVQDYSLEGIQGKELHNLTVGVIGTGKIGRTVIKN LKGFECNIIAYDINENEEVKAHAKYVKLEELLMSSDVITVHVPGAEDNYHLINKNSISKMKDGVFIINTARGSIINTYDF IDAVEKGKIGGAALDVIENETNLYYKNLKGEVLGNRELAVLKSYPNVIITPHTAFYTDQAVSDMVENSILSCIAFYEGKE NPWKVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanHB | YP_008394258.1 | VanH protein, D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 1e-65 | 45 |
| EF2295 | NP_815952.1 | D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 5e-65 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CA_C1543 | NP_348170.1 | lactate dehydrogenase | AF155139.2.orf4.gene | Protein | 3e-65 | 45 |
| CA_C1543 | NP_348170.1 | lactate dehydrogenase | NC_005054.2598279.p0 | Protein | 3e-63 | 44 |
| CA_C1543 | NP_348170.1 | lactate dehydrogenase | NC_014475.1.orf2.gen | Protein | 3e-63 | 44 |
| CA_C1543 | NP_348170.1 | lactate dehydrogenase | AF310956.2.orf4.gene | Protein | 7e-66 | 44 |
| CA_C1543 | NP_348170.1 | lactate dehydrogenase | U35369.1.gene5.p01 | Protein | 1e-65 | 43 |
| CA_C1543 | NP_348170.1 | lactate dehydrogenase | FJ349556.1.orf3.gene | Protein | 8e-61 | 43 |
| CA_C1543 | NP_348170.1 | lactate dehydrogenase | AF130997.1.orf3.gene | Protein | 1e-58 | 42 |
