Gene Information

Name : cdrC (CA_C1412)
Accession : NP_348040.1
Strain : Clostridium acetobutylicum ATCC 824
Genome accession: NC_003030
Putative virulence/resistance : Resistance
Product : methyl methane sulfonate/mytomycin C/UV resistance protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2310
EC number : -
Position : 1558691 - 1559266 bp
Length : 576 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTATAATATTAACAAAAGGTCAAAAAATAAATTTATCAAAAGAAGGAATTTTAAAAAAGATATTAGTAGGTTTAGG
CTGGGATACAAATAAATATGATGGTGGATATGATTTTGATTTAGATGCCTCAGTATTTTGTTGTGGAGAAGACGGAAAAG
CACATAAAGATACAGACTTTGTATTCTACAATAACTTAAAACATCCTTCAGGTGCAATAGAGCATTTAGGAGATAATTTA
ACTGGTGGAGGAGAAGGAGATGACGAGCAGGTAGTAATAGATCTTGAAAAAGTGCCTGAAGAAATACAGAAAATAGCTTT
CTCAGTAACTATTTATGATCCGGAAGTAAGAAAACAAAACTTTGGACAAGTTTCCAATGCTTTTGTAAGAATAGTTAACT
CAGATAATAATGAAGAATTAGTAAGATATGATTTAGGAGAAGATTTTTCAATAGAAACTGCAGTTGTAGTAGCAGAATTA
TATAGAAATAATGGAGACTGGAAGTTTAATGCTATAGGAAGCGGTTTCCAAGGTGGACTAGCAGCTTTATGTAAAAATTA
TGGACTTAATGCTTAG

Protein sequence : 
MAIILTKGQKINLSKEGILKKILVGLGWDTNKYDGGYDFDLDASVFCCGEDGKAHKDTDFVFYNNLKHPSGAIEHLGDNL
TGGGEGDDEQVVIDLEKVPEEIQKIAFSVTIYDPEVRKQNFGQVSNAFVRIVNSDNNEELVRYDLGEDFSIETAVVVAEL
YRNNGDWKFNAIGSGFQGGLAALCKNYGLNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACY75542.1 tellurium-resistance protein Not tested Tn6060 Protein 7e-51 58
terE_2 NP_287119.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 3e-48 57
tlrB AAF36434.1 putative tellurium resistance protein B Not tested TAI Protein 2e-48 57
terE NP_286711.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 3e-48 57
terD NP_286710.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 3e-49 55
terD_2 NP_287118.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 3e-49 55
tlrC AAF36435.1 putative tellurium resistance protein C Not tested TAI Protein 6e-49 55
unnamed ACY75541.1 tellurium-resistance protein Not tested Tn6060 Protein 2e-45 51
terZ ACY75546.1 tellurite resistance protein TerZ Not tested Tn6060 Protein 2e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cdrC NP_348040.1 methyl methane sulfonate/mytomycin C/UV resistance protein BAC0390 Protein 5e-49 56
cdrC NP_348040.1 methyl methane sulfonate/mytomycin C/UV resistance protein BAC0389 Protein 2e-49 55