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Name : polA (CA_C1098) Accession : NP_347732.1 Strain : Clostridium acetobutylicum ATCC 824 Genome accession: NC_003030 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1266368 - 1268983 bp Length : 2616 bp Strand : + Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : ATGGAAAGACTGCTTGTGTTAGATGGTAATAGTCTTATGAATAGGGCTTTTTATGCTTTGCCTGAACTTACAAATGCTGA AGGACTCCATACAAATGGAATATATGGCTTTATGACTATGCTTATAAAAATGCGAGATGAAATAAAGCCTGATTACATAG TTACAACCTTTGATAGGAAAGCACCTACCTTTAGACATAAGGAATACGAGGATTACAAGGCAGGAAGAAAAAAAATGCCT CCTGAACTTAGTGAGCAGTTTCCTGTATTAAAAGAATTACTTGAAAAGTTAGCTATAAACATATTTGAAATAGATGGTTT TGAGGCCGATGACCTCATAGGAACATTAGCATGTTTTGCTAAAGAAAAGGGAATAGAAGTATACATAGTTACAGGGGATA AAGATGCCCTTCAGCTTGCAGATGATAATGTTAAGGTTGTTATAAATAAAAAAGGAATGACCGAAAAAGAAATATACGAT AAAAATAGAATGATTGAAGAGTTTGGTGTTACTCCAGTTCAGTTTATAGATGTAAAAGGACTTATGGGAGATAATTCTGA CAACATACCGGGAGTACCAGGAATAGGCCCTAAGACAGCCTTTAAGCTCATACAAGAATACGGCAGTGTAGAGAATGTTC TCGACAATATACAAAATATAAAAGGCAAAAAAATAAAAGAGAACTTAGAGAATTATGCAGAGCAAGCAGTTTTTAGTAAA AAGCTTGCAACCATAATGACTAATGTTCCTATTGAAATAGATATTGAGGAAATAAGATCTAAAGAAAGTTTTGATGTTGA GGGTGCTAGACATCTTTTAAGAAGACTTCAATTTAAGAGTATAATAGAAAAAATTCCAAGTCTTAATGTTGAAGCGGAAA AAAGTGATTTTGTTGTAGAGTATAATTTAATAGACGAATTTCCAAAATTTCATGAATTATTTTCAGCTATTAAAGATACT GAAATTTATATGTCATATTCTATAGGAAATGGAGAGCTGTATTCTAAGATTTATATTGATACAATTTTTATGAAAGTAGA AGAAAAGACATATATAGTAGATTTAAAGAAAATAATTGAGCAAAATAGAGAAGATGTTCTCAAAGATTTAAAAGAGTTCT TTGAGAATAAGAAAATAGCTAAGATAATACATGATTCTAAAAATATGTATACAGTGCTTATGAAGAATGGCATAAAAATA GAGAATCTGGCATTTGATACGGCAATAGCAGAATACCTTATAAATCCATCTAAAAAAGAGTACAATTTAAAAGACGCGGC GGAAGAGATGCTCTTATTGGATTTGACGGGAGAAGACAATGATATTAAAATAAAAGAAGTTTACGTTATGGATAAAATTT ACAATAAACTTAAAGACAAAATAAAAGAATATGATATGGATGAGTTATACTATAAAGTAGAGCTTCCACTCATAGAAGTT TTATCCTCTATGGAGAGTGAAGGATTTAAGGTTGAAAAAAATAAACTTCAACAAATTGGCGATAAATTTACAGTTGAAAT AGCAAAGGTTAAAGATGAAATATATAACATGGCAGGTGAGGAGTTTAATATAAGTTCTCCAAAGCAACTTGGAAAAATAT TATTTGAAAAATTGGATTTACCAGTTATAAAGAAAACCAAAACGGGTTACTCCACTAATGCTGAGGTTTTGGAAAAGCTG ATGGATAAGCATCCTATAATTGAAAAGGTTGTATACTATAGACAGCTTACAAAACTCTATTCAACATATGTTGAAGGACT TAAACCTGTTATAGATGTTGATGAAAAGATACATTCAAGTTTTAATCAAACTGTAACTACAACAGGTAGGCTTTCAAGTA CAGAACCAAATCTTCAAAACATACCTATTAAAAATGAGATGGGAAGAGAAATAAGGAAAGTTTTTGTGCCTGAAAATGAT AATTGTATAATACTTTCAGCAGACTATTCCCAAATAGAATTAAGAGTTTTAGCTCATATTGCTGATGATGAAAATTTAAT TAATGCATTTAAACATCACAGTGATATCCATACAAAGACAGCTTCGGAGGTTTTTAGAGTACCTATTGAAGAGGTTACGT CTAGAATGAGAAGTAATGCAAAGGCTGTAAACTTTGGAATTGTCTATGGAATAAGTGATTTCAGTCTAGCTCAGGATATA AAGGTATCCAAGAAGGAAGCTAAAGAATACATTGATACTTATTTTGAAAGATATCCAAATGTAAAAAAATACTTGGAGGA TATAGTGGTTACAGCTAAAAAGAATATGTATGTAAACACTATAATGAACAGAAGAAGAATTATTCCAGAAATAGCCTCAT CAAATAAAATTGTTAAAGGCTTTGGAGAGAGACTTGCTATGAATACACCTATACAGGGAAGTGCAGCAGATCTTATAAAA CTTTCAATGGTTAATGTGTATAGTAAAATAAAGCAACTAAAGCTTAAAAGTAGGCTTATACTTCAAGTGCATGATGAACT AATTTTGAATGTACATAAGGATGAACTCGAAAAAGTAAAGGAATTAGTAAAACTTGAAATGGAAGAGGTTATGGAACTTA AAGTTCCTTTGGAAGTAGATATAGAATCAGGAAATACCTGGTATGAAGCAAAATAA Protein sequence : MERLLVLDGNSLMNRAFYALPELTNAEGLHTNGIYGFMTMLIKMRDEIKPDYIVTTFDRKAPTFRHKEYEDYKAGRKKMP PELSEQFPVLKELLEKLAINIFEIDGFEADDLIGTLACFAKEKGIEVYIVTGDKDALQLADDNVKVVINKKGMTEKEIYD KNRMIEEFGVTPVQFIDVKGLMGDNSDNIPGVPGIGPKTAFKLIQEYGSVENVLDNIQNIKGKKIKENLENYAEQAVFSK KLATIMTNVPIEIDIEEIRSKESFDVEGARHLLRRLQFKSIIEKIPSLNVEAEKSDFVVEYNLIDEFPKFHELFSAIKDT EIYMSYSIGNGELYSKIYIDTIFMKVEEKTYIVDLKKIIEQNREDVLKDLKEFFENKKIAKIIHDSKNMYTVLMKNGIKI ENLAFDTAIAEYLINPSKKEYNLKDAAEEMLLLDLTGEDNDIKIKEVYVMDKIYNKLKDKIKEYDMDELYYKVELPLIEV LSSMESEGFKVEKNKLQQIGDKFTVEIAKVKDEIYNMAGEEFNISSPKQLGKILFEKLDLPVIKKTKTGYSTNAEVLEKL MDKHPIIEKVVYYRQLTKLYSTYVEGLKPVIDVDEKIHSSFNQTVTTTGRLSSTEPNLQNIPIKNEMGREIRKVFVPEND NCIILSADYSQIELRVLAHIADDENLINAFKHHSDIHTKTASEVFRVPIEEVTSRMRSNAKAVNFGIVYGISDFSLAQDI KVSKKEAKEYIDTYFERYPNVKKYLEDIVVTAKKNMYVNTIMNRRRIIPEIASSNKIVKGFGERLAMNTPIQGSAADLIK LSMVNVYSKIKQLKLKSRLILQVHDELILNVHKDELEKVKELVKLEMEEVMELKVPLEVDIESGNTWYEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 7e-150 | 43 |
