Gene Information

Name : SP_1442 (SP_1442)
Accession : NP_345896.1
Strain : Streptococcus pneumoniae TIGR4
Genome accession: NC_003028
Putative virulence/resistance : Unknown
Product : IS66 family Orf2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1362492 - 1362842 bp
Length : 351 bp
Strand : -
Note : similar to GP:6009406; identified by sequence similarity

DNA sequence :
ATGACAATTCATCTATCTAGCCTAGGGCAGGTCTATCTCGTATGTGGGAAAACGGATATGAGGCAAGGCATTGATTCATT
GGCTTATCTGGTTAAAACCCACTTTGAATTAGATCCTTTCTCCGGTCAAGTTTTTCTCTTTTGTGGTGGACGTAAAGACC
GCTTTAAAGCCCTTTACTGGGATGGTCAAGGATTTTGGCTACTATATAAACGCTTTGAGAACGGAAAACTGACTTGGCCC
AGTACAGAAAAGGATGTCAAAGCTCTCACACCTGAACAAGTAGATTGGCTTATGAAGGGCTTTTCTATCACTCCAAAAAT
AAATTTATCAGAAAGTCGTGATTTCTATTGA

Protein sequence :
MTIHLSSLGQVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGGRKDRFKALYWDGQGFWLLYKRFENGKLTWP
STEKDVKALTPEQVDWLMKGFSITPKINLSESRDFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-14 46
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-10 42
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-10 42
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 3e-11 41
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 1e-09 41
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 2e-11 41
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-11 41
unnamed AAC31493.1 L0014 Not tested LEE Protein 8e-10 41
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 8e-10 41
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-09 41
unnamed AAL99258.1 unknown Not tested LEE Protein 8e-10 41
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 1e-09 41
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 8e-10 41
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 1e-09 41
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 7e-09 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 7e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SP_1442 NP_345896.1 IS66 family Orf2 VFG1698 Protein 7e-11 42
SP_1442 NP_345896.1 IS66 family Orf2 VFG1709 Protein 3e-10 41
SP_1442 NP_345896.1 IS66 family Orf2 VFG1665 Protein 1e-11 41
SP_1442 NP_345896.1 IS66 family Orf2 VFG0792 Protein 3e-10 41