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Name : MCA0903 (MCA0903) Accession : YP_113388.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 947706 - 949553 bp Length : 1848 bp Strand : + Note : identified by match to protein family HMM PF02719 DNA sequence : GTGATTCGAGCACACCTTGACAAGTTGCGTTCGCGCACTGTCATTTTCCTGCACGACCTGCTGATGGTGCCGCTGGCATG GTTCGGCGCCTATTGGTTGCGCTTCAATCTGTCCGAAGTGCCGGAGCCGCACCTGAGCGTTGCGATCAAATGGTTCCCTC TCGTGGCCGTGATCCAGGGCGCGGTGTTCCGCCTGTTCGGCCTGTACCGGGGCATCTGGCGTTTTGCTTCCATGCCCGAT CTCCTTCGGATCGCCAAAGCTTCCGCCAGCGGCATCGTCCTGATCGTCGCGGCGCTTTTCTTCCTGGAGCGGCTGGACGC CGTGCCACGTTCAGTCATCCCGCTCTACACGTTGCTGTTGGTTCTGTTTTTGTCGACGCCGCGCGCCTTGTACCGGATGT GGAAGGATCGCTCCGTGCACCTGATGAACGGACGCCGCGCCCTGATCGTGGGAGCCGGCAAGGCCGGCGAAACCCTGGTG AGGGACCTGCTGCGCAGCAGCGAATCGGCTTTCGCACCGGTGGCATTCGTCGATGACGACCCGCACAAGCGTGGCTGGGA AATCCATGGTGTGCGGGTGCGCGGTTCCTGCGACCGTATCCCTGCGCTGGCCGAAAAACTGGACATCGAGGCCATCCTGA TCGCGATGCCATCGGCCGGCGATCGGGACATGCGCCGCATCGTCGAGATCTGCGAGACGACCGGCCTGCCGTTTTTGACG CTGCCGTCGGTGCAGGAGATGTGGGGAGGGCGGGTGTCCGATGCCTTGCGGGACGTGTCCATCGAAGACCTGTTGGGTCG CGCCCCGGTGAGGCTGGATTCCGCCGAACTGGCCGGTTACCTCGATGGCAAGTGCATCATGGTGACGGGGGGGGGCGGGT CCATCGGCTCGGAGCTGTGCAAGCAGATCGCGCGATTCTCGCCGGGACGTCTGGTCGTCTTCGAACACTGCGAATTCAAT CTGTATCGCGTCGAGCTCGAACTACGGCAGGCCTTTCCCGACATGGCGATACATGCCGTATTGGGAGACGTCACCGATGC CGCTTCGGTGAGACGGGCGATCGACGTCCACAAACCGGCCATCATCTTCCATGCCGCGGCTTACAAGCACGTGCCCTTGC TGCAGCAGCAGGTCCGGGAAGCGGTCTTCAACAACGTGATCGGGACGCGCACGGTGGCCGAAGTCGCGGTCGAGTACGGG GTCGGCGAATTCGTGCTGATCTCCACGGACAAAGCGGTCAATCCCACCAACGTGATGGGTGCCACCAAGCGTGCCGCCGA ACTGGTGGTTCAGAGTTACAACGGTCACACGGCGACGCGGTTCATCACCGTGCGTTTCGGCAACGTGCTCGGCTCGGCAG GCAGCGTGGTGCCGCTGTTCCGCAAGCAGATCCGTAACGGCGGGCCGGTTACCGTGACGCATCCGGAAGTCACGCGGTTT TTCATGACCATCCCCGAAGCTTGTCAGCTCATCATGAAGGCGGCCGCGACCGGCCAGGGGGGGGAAGTGTTCGTGCTGGA CATGGGGGAGGCCGTCCGCATCGGCTACCTGGCCGAACAGATGATCCGTCTCAGTGGCAAACGCCCAGGGACGGACATCG CCATCGAATACGTCGGCCTGCGGCCGGGCGAAAAAATGCATGAGGAGCTATTCCTCGGCTTCGAAAAGCTCCAGCCGACC AGTCATGCCAAGCTGATGCTGGCCCAGGCGCCGCCGTGTGACCGTTCTCTCGTCGCGGCCCGGATCGCCGCGATGGAGGC AGCCTGCCGCAGTTTCGACCAGGACGGGGTCTTTCGGGAACTGTGCCATCTGGTGCCGGAATACCGTGACGCAGGGTCCG GAAGCTGA Protein sequence : MIRAHLDKLRSRTVIFLHDLLMVPLAWFGAYWLRFNLSEVPEPHLSVAIKWFPLVAVIQGAVFRLFGLYRGIWRFASMPD LLRIAKASASGIVLIVAALFFLERLDAVPRSVIPLYTLLLVLFLSTPRALYRMWKDRSVHLMNGRRALIVGAGKAGETLV RDLLRSSESAFAPVAFVDDDPHKRGWEIHGVRVRGSCDRIPALAEKLDIEAILIAMPSAGDRDMRRIVEICETTGLPFLT LPSVQEMWGGRVSDALRDVSIEDLLGRAPVRLDSAELAGYLDGKCIMVTGGGGSIGSELCKQIARFSPGRLVVFEHCEFN LYRVELELRQAFPDMAIHAVLGDVTDAASVRRAIDVHKPAIIFHAAAYKHVPLLQQQVREAVFNNVIGTRTVAEVAVEYG VGEFVLISTDKAVNPTNVMGATKRAAELVVQSYNGHTATRFITVRFGNVLGSAGSVVPLFRKQIRNGGPVTVTHPEVTRF FMTIPEACQLIMKAAATGQGGEVFVLDMGEAVRIGYLAEQMIRLSGKRPGTDIAIEYVGLRPGEKMHEELFLGFEKLQPT SHAKLMLAQAPPCDRSLVAARIAAMEAACRSFDQDGVFRELCHLVPEYRDAGSGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-84 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-84 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MCA0903 | YP_113388.1 | polysaccharide biosynthesis protein | VFG0029 | Protein | 2e-83 | 45 |
