Gene Information

Name : MCA0823 (MCA0823)
Accession : YP_113322.1
Strain : Methylococcus capsulatus Bath
Genome accession: NC_002977
Putative virulence/resistance : Unknown
Product : ISMca4, transposase, OrfAB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 866292 - 867380 bp
Length : 1089 bp
Strand : +
Note : identified by match to protein family HMM PF00665; match to protein family HMM PF01527

DNA sequence :
ATGAAGAAGTCGAAGTTTTCGGACAGCCAGATCATCGAGGCGCTGAAGCGGGTTGAAGCCGGGCTGTCGGTGCCGGAGTT
GTGCCGGGAATTGGGGATCAGCACGGCGGCGTTTTGCAAGTGGCGAGCGAAGCATGGCGGCCTGGCCGTGTCGATGATGG
CCCGGATGAAGGAACTGGAAGCCGAGAATGCCCGGCTGAATGAAGATGCACGCGGAGGAGCGCCTGAAGGCCGACATTCT
TCAGGAGGCGATTTCAAAAAAGTGGTGAGGCCATCTCACCTCCGCGCGACGGCCAGGCGTGCTGTCAGCGGGCACAGGGT
GTCAATCCGCCTTGGCTGCGCGGCATTTCAGGTCAGCGGAACCTGTTATCGGCACAGCGCCAAGCGCAATGCCGGGAACG
AAGAAATCGCCGACTGGCTGATGCGGCTGACCGACAACCACCGCAACTGGGGATTCGGGCTGTGCTTCCTGTATTTGCGC
AATGTGAAAGGATTTGGCTGGAACCACAAACGTGTGTGCCGGATATGCCGCGAACTGGAACTGAATCTTCGCATCAAGCC
GAGGAAACGGCTGAAACGGGACAAGCCTGAACCGCTCACGGCGCCGACACGGATCAACCAAGTCTGGTCGATGGACTTCA
TGCATGATCAGCGCGCAGATGGAAGGAAGTTCAGGTTGTTCAATGTGATTGATGACTTCAACCGCGCGTCGCTAGGGATG
GAGGTGGACTTCTCGCCGCCGTCCGAGCGCGTCACCCGCGCCCTGGAGCAAGTGATGGAATGGCGGGGGCGACCACGGGT
GATCCGCTGCGACAACGGGCCGGAGAATATCAGCGCGAAGGTCCAGGCCAGGGCGGCACGGCAAGGCATCCGGATTGAAT
GCATCCAGCCGGGCAACCCGCAGCAGAACGCGCATGTGGAGCGATTCAACCGCACGGTGCGCCATGAATGGCTGTCGCAG
TATGACTGGGAGTCACTGGATGAAGTGCAGGCATTCGCAACACGCTGGATGTGGACGTACAATCACGAACGCCCAAACAT
GGCCTTGGGCGGCATCACGCCAAAACAGCGGTTGGCCAGGGCCGCATAG

Protein sequence :
MKKSKFSDSQIIEALKRVEAGLSVPELCRELGISTAAFCKWRAKHGGLAVSMMARMKELEAENARLNEDARGGAPEGRHS
SGGDFKKVVRPSHLRATARRAVSGHRVSIRLGCAAFQVSGTCYRHSAKRNAGNEEIADWLMRLTDNHRNWGFGLCFLYLR
NVKGFGWNHKRVCRICRELELNLRIKPRKRLKRDKPEPLTAPTRINQVWSMDFMHDQRADGRKFRLFNVIDDFNRASLGM
EVDFSPPSERVTRALEQVMEWRGRPRVIRCDNGPENISAKVQARAARQGIRIECIQPGNPQQNAHVERFNRTVRHEWLSQ
YDWESLDEVQAFATRWMWTYNHERPNMALGGITPKQRLARAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 6e-42 41