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Name : MCA0823 (MCA0823) Accession : YP_113322.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : ISMca4, transposase, OrfAB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 866292 - 867380 bp Length : 1089 bp Strand : + Note : identified by match to protein family HMM PF00665; match to protein family HMM PF01527 DNA sequence : ATGAAGAAGTCGAAGTTTTCGGACAGCCAGATCATCGAGGCGCTGAAGCGGGTTGAAGCCGGGCTGTCGGTGCCGGAGTT GTGCCGGGAATTGGGGATCAGCACGGCGGCGTTTTGCAAGTGGCGAGCGAAGCATGGCGGCCTGGCCGTGTCGATGATGG CCCGGATGAAGGAACTGGAAGCCGAGAATGCCCGGCTGAATGAAGATGCACGCGGAGGAGCGCCTGAAGGCCGACATTCT TCAGGAGGCGATTTCAAAAAAGTGGTGAGGCCATCTCACCTCCGCGCGACGGCCAGGCGTGCTGTCAGCGGGCACAGGGT GTCAATCCGCCTTGGCTGCGCGGCATTTCAGGTCAGCGGAACCTGTTATCGGCACAGCGCCAAGCGCAATGCCGGGAACG AAGAAATCGCCGACTGGCTGATGCGGCTGACCGACAACCACCGCAACTGGGGATTCGGGCTGTGCTTCCTGTATTTGCGC AATGTGAAAGGATTTGGCTGGAACCACAAACGTGTGTGCCGGATATGCCGCGAACTGGAACTGAATCTTCGCATCAAGCC GAGGAAACGGCTGAAACGGGACAAGCCTGAACCGCTCACGGCGCCGACACGGATCAACCAAGTCTGGTCGATGGACTTCA TGCATGATCAGCGCGCAGATGGAAGGAAGTTCAGGTTGTTCAATGTGATTGATGACTTCAACCGCGCGTCGCTAGGGATG GAGGTGGACTTCTCGCCGCCGTCCGAGCGCGTCACCCGCGCCCTGGAGCAAGTGATGGAATGGCGGGGGCGACCACGGGT GATCCGCTGCGACAACGGGCCGGAGAATATCAGCGCGAAGGTCCAGGCCAGGGCGGCACGGCAAGGCATCCGGATTGAAT GCATCCAGCCGGGCAACCCGCAGCAGAACGCGCATGTGGAGCGATTCAACCGCACGGTGCGCCATGAATGGCTGTCGCAG TATGACTGGGAGTCACTGGATGAAGTGCAGGCATTCGCAACACGCTGGATGTGGACGTACAATCACGAACGCCCAAACAT GGCCTTGGGCGGCATCACGCCAAAACAGCGGTTGGCCAGGGCCGCATAG Protein sequence : MKKSKFSDSQIIEALKRVEAGLSVPELCRELGISTAAFCKWRAKHGGLAVSMMARMKELEAENARLNEDARGGAPEGRHS SGGDFKKVVRPSHLRATARRAVSGHRVSIRLGCAAFQVSGTCYRHSAKRNAGNEEIADWLMRLTDNHRNWGFGLCFLYLR NVKGFGWNHKRVCRICRELELNLRIKPRKRLKRDKPEPLTAPTRINQVWSMDFMHDQRADGRKFRLFNVIDDFNRASLGM EVDFSPPSERVTRALEQVMEWRGRPRVIRCDNGPENISAKVQARAARQGIRIECIQPGNPQQNAHVERFNRTVRHEWLSQ YDWESLDEVQAFATRWMWTYNHERPNMALGGITPKQRLARAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 6e-42 | 41 |
