|
Name : MCA0746 (MCA0746) Accession : YP_113249.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Virulence Product : sugar isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 784416 - 785408 bp Length : 993 bp Strand : - Note : identified by similarity to SP:P45395; match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGGGGAACCCACAGTATCCGGCGCTCGACGAACGTACCCTCTGTGCGCTCGCCGTCAACGTCATCAATACGGAGGCGGC CGCGATAAGCGCTTTGGCCGACCGCATCGACTCGAACTTCGCCGCCGGTTGCCGGCTGATTCTTGGCTGCCACGGCCGCG TGGTCGTCACGGGCATGGGCAAATCCGGCCATATCGGCGGGAAAATAGCGTCGACCCTCGCCAGTACCGGCACGCCGGCA TTCTTCGTCAATCCCGGAGAAGCCTGCCACGGCGATCTGGGCATGATCACCCGCAATGACGTCGTGCTGGCGCTGTCCAA TTCCGGCGAAACGGCAGAGCTTCTGACCATCCTGCCGCTGATCAAACGGCTCGGAATCCCGCTGATCGCCATGACGGGCA ACCGACTTTCAACGCTGGCCCGCCAGTCCAGCATCCACCTCGACACCGGCGTCCAACAGGAGGCCTGTCCGCTGGGACTG GCGCCGACCTCGAGCACGACCGCCGCGCTGGCCATGGGCGACGCACTGGCCGTCGCACTGCTCGAGGCGCGAGGCTTCAC GCGGGAGGATTTCGCGTTTTCCCATCCCGGCGGCAGTCTCGGCAGACGCCTGTTGACTTTCGTCCGTGACATCATGCATA CGGGAGACGATACCCCCGTCATCGGCCTGGAGGCCAGCGTGCGGGATGCCCTGCTGGAAATGACGGCGAAGAAGCTCGGC ATGACGGCGATCGTCGATGGCGCCGGTACGATTCAAGGCGTATTCACGGATGGCGATCTGCGCCGCCTGCTGGAAAAAGC CCAGGACATCCACGCAACCCCGATCACCGCGGTGATGACCCGATCCTGCGTGACCGTCGAAGGCAGCCTGCTCGCCGCCG AAGCCGTCCGGATCATGGAACAGAAGCGGATCAACGCTCTGCCGGTCGTGGAAAACGGGCGGCTGATCGGGGCGATCAAC ATGCATGATCTCCTGCGTGCGGGGGTATTGTGA Protein sequence : MGNPQYPALDERTLCALAVNVINTEAAAISALADRIDSNFAAGCRLILGCHGRVVVTGMGKSGHIGGKIASTLASTGTPA FFVNPGEACHGDLGMITRNDVVLALSNSGETAELLTILPLIKRLGIPLIAMTGNRLSTLARQSSIHLDTGVQQEACPLGL APTSSTTAALAMGDALAVALLEARGFTREDFAFSHPGGSLGRRLLTFVRDIMHTGDDTPVIGLEASVRDALLEMTAKKLG MTAIVDGAGTIQGVFTDGDLRRLLEKAQDIHATPITAVMTRSCVTVEGSLLAAEAVRIMEQKRINALPVVENGRLIGAIN MHDLLRAGVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-45 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 6e-46 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-45 | 43 |
