Gene Information

Name : MCA0746 (MCA0746)
Accession : YP_113249.1
Strain : Methylococcus capsulatus Bath
Genome accession: NC_002977
Putative virulence/resistance : Virulence
Product : sugar isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 784416 - 785408 bp
Length : 993 bp
Strand : -
Note : identified by similarity to SP:P45395; match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393

DNA sequence :
ATGGGGAACCCACAGTATCCGGCGCTCGACGAACGTACCCTCTGTGCGCTCGCCGTCAACGTCATCAATACGGAGGCGGC
CGCGATAAGCGCTTTGGCCGACCGCATCGACTCGAACTTCGCCGCCGGTTGCCGGCTGATTCTTGGCTGCCACGGCCGCG
TGGTCGTCACGGGCATGGGCAAATCCGGCCATATCGGCGGGAAAATAGCGTCGACCCTCGCCAGTACCGGCACGCCGGCA
TTCTTCGTCAATCCCGGAGAAGCCTGCCACGGCGATCTGGGCATGATCACCCGCAATGACGTCGTGCTGGCGCTGTCCAA
TTCCGGCGAAACGGCAGAGCTTCTGACCATCCTGCCGCTGATCAAACGGCTCGGAATCCCGCTGATCGCCATGACGGGCA
ACCGACTTTCAACGCTGGCCCGCCAGTCCAGCATCCACCTCGACACCGGCGTCCAACAGGAGGCCTGTCCGCTGGGACTG
GCGCCGACCTCGAGCACGACCGCCGCGCTGGCCATGGGCGACGCACTGGCCGTCGCACTGCTCGAGGCGCGAGGCTTCAC
GCGGGAGGATTTCGCGTTTTCCCATCCCGGCGGCAGTCTCGGCAGACGCCTGTTGACTTTCGTCCGTGACATCATGCATA
CGGGAGACGATACCCCCGTCATCGGCCTGGAGGCCAGCGTGCGGGATGCCCTGCTGGAAATGACGGCGAAGAAGCTCGGC
ATGACGGCGATCGTCGATGGCGCCGGTACGATTCAAGGCGTATTCACGGATGGCGATCTGCGCCGCCTGCTGGAAAAAGC
CCAGGACATCCACGCAACCCCGATCACCGCGGTGATGACCCGATCCTGCGTGACCGTCGAAGGCAGCCTGCTCGCCGCCG
AAGCCGTCCGGATCATGGAACAGAAGCGGATCAACGCTCTGCCGGTCGTGGAAAACGGGCGGCTGATCGGGGCGATCAAC
ATGCATGATCTCCTGCGTGCGGGGGTATTGTGA

Protein sequence :
MGNPQYPALDERTLCALAVNVINTEAAAISALADRIDSNFAAGCRLILGCHGRVVVTGMGKSGHIGGKIASTLASTGTPA
FFVNPGEACHGDLGMITRNDVVLALSNSGETAELLTILPLIKRLGIPLIAMTGNRLSTLARQSSIHLDTGVQQEACPLGL
APTSSTTAALAMGDALAVALLEARGFTREDFAFSHPGGSLGRRLLTFVRDIMHTGDDTPVIGLEASVRDALLEMTAKKLG
MTAIVDGAGTIQGVFTDGDLRRLLEKAQDIHATPITAVMTRSCVTVEGSLLAAEAVRIMEQKRINALPVVENGRLIGAIN
MHDLLRAGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 6e-46 43
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 1e-45 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-45 43