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Name : xerD (MCA0396) Accession : YP_112927.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 399926 - 400855 bp Length : 930 bp Strand : + Note : identified by similarity to SP:P21891; match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225 DNA sequence : GTGAGTGAGGTTCTGCCCGATGCCGGAGCAGTCCGGGAGGCCGACCTTCTGGCGATCCAGCGCTTCGTCGAGTCGCTGTG GGTGGAAGAGGGTTTGAGCCCTCACACACTCAAGGCCTACGGGAGCGATCTCCGTCTCTTCGCAGCCTGGCTGGCAACCA ACCGGTGCGCGGAGCTGACGGCACTGACCGGGGAAGACATCGAGGCCTATCTGGGGTGGAGGCACAGCCGGAAAAGCAAG AGCCGGACTTCGGCGCGCGTACTTTCCTCCATCCGGCATTTCTGCGCGTACCGACTGCGACGGGGAGAGATCACCGGTGA TCCTTGTGCCTTGATTGCTCCGCCGAAGCTGGGGCGTTTCCTTCCCGACACGCTGACAGAATCGGAGGTGGAGGCCCTGC TGGCCGCGCCGGACGTCGATACTCCGCTGGGCTTCCGCGACCGGGCCATGCTGGAAATGCTCTACGCCACCGGTTTGCGC GTCTCCGAGCTGGTCGGTTTGAGCTTCGGCCAGATCAGTCTGCGCCAGGGGGTGGTCCGGATCAGTGGCAAGGGGGACAA GGACCGGCTGGTGCCTGTCGGCGAGGAGGCCCTGGACTGGCTGGAGCGCTATCTCGACAAGGTGCGGCCGGTCACCCTGA AGGGTAGGCAGAGTGATTTCCTGTTCGTCACCGACCGGGGGGGGGCGATGACGCGCCAGGCCTTCTGGCATCTCATCAAG CGTTACGCCGGGCAGGCCGGGATTTCCAAGCCGTTGTCCCCCCATACCCTGCGTCATGCCTTCGCGACTCATCTGCTGAA TCACGGAGCGGATCTCCGCGTCGTGCAAATGCTGCTCGGACACAGCGACCTGTCGACCACCCAGATCTACACCCATGTCG CCCAGGAGCGGCTCAAGGAACTGCATACCCGCTTCCATCCGCGGGGCTGA Protein sequence : MSEVLPDAGAVREADLLAIQRFVESLWVEEGLSPHTLKAYGSDLRLFAAWLATNRCAELTALTGEDIEAYLGWRHSRKSK SRTSARVLSSIRHFCAYRLRRGEITGDPCALIAPPKLGRFLPDTLTESEVEALLAAPDVDTPLGFRDRAMLEMLYATGLR VSELVGLSFGQISLRQGVVRISGKGDKDRLVPVGEEALDWLERYLDKVRPVTLKGRQSDFLFVTDRGGAMTRQAFWHLIK RYAGQAGISKPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQERLKELHTRFHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-64 | 54 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-64 | 54 |
