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Name : lysS (MCA0301) Accession : YP_112835.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 296343 - 297833 bp Length : 1491 bp Strand : - Note : identified by similarity to SP:P14825; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : ATGAGTGAACTGCAAGACGAAAACAAACTGGTCGCGCTGCGCCGCGAAAAGCTCGGCAAGCTGCGGCAAACAGGGGTCGC TTTCCCAAATGACTTCCGCCGCGACGCCCTCGCCGCCGAACTACGGGCACGCTACGGGGACGAAACGGCCGAGGCACTGG AAGAAACCGCCGTATCGGTCAAGCTGGCCGGGCGGCTGATGGGCAAGCGTATCATGGGCAAAGCCAGCTTTGCCCATATC CAGGACATGTCCGGCCGTATCCAGATTTTCCTGCAGCGCGATGGACTGGCCGAAGGCGTGTACGAGGAGTTCAAGAGTTG GGACATCGGCGATGTGATCGGCGTGGAAGGCACGGTGTTCCGCACCAAGACCGGCGAGCTGTCGGTGAAGGCATCGAACA TCCGCCTGCTCACCAAATCACTGCGTCCGCTGCCCGAGAAATTCCACGGCCTGACCGACGCCGAGACCCGCTACCGCCAG CGCTACCTCGACCTCCTCATGAACGAGGAGTCGCGCCGGGTATTCCAGCTCCGCAGCGCCATCGTGCGCTACATCCGCGA CTTCTTGAGCGAGCGTGGCTTCATCGAGGCAGAGACGCCGATGATGCAGGTGATCCCCGGCGGCGCCCGGGCCAAACCGT TCGTCACCCATCATAATGCGCTGGGGCTGGATCTGTATCTGCGCATCGCTCCCGAGCTCTACCTGAAGCGGCTGGTGGTG GGCGGCTTCGAAAAAGTATTCGAGATCAACCGCAGCTTCCGCAACGAGGGCTTGTCCACTCGGCACAATCCCGAATTCAC GATGATCGAGTTCTATCAGGCCTATGCCGATTACCGCGACCTGATGGATCTGACCGAAACGCTGATGCGGGGAATCGCGC AGAACCTGCTGGGCGGCACCGTCGTCACCCATCAGGGCAAGGATTACGATCTGGGCCGGCCGTTCCGGCGCATGACGGTG CTGGAATCGATCATCCACTACAACCCGGACATCCGGGCCGAAGACTTGGCCGAGCGCGAAAGCGCCGCGGCCATCGCGGC CGGGCTGGGCATTCCGGTTGCCGCCGGCGACGGACTCGGCAAGATCCAGACCGAAATCTTCGAAAAGACCGTGGAAGACC GGCTGGATGAACCAACCTTCATCACCGCCTATCCGGCCGAAGTCTCGCCGCTGGCGCGGCGCAACGACGAAAACCCCTTC ATCACAGACCGCTTCGAGTTTTTCGTGGGCGGGCGCGAGCTGGCGAACGGCTTTTCCGAGCTCAACGACCCGGAAGACCA GGCGGAACGGTTCAGAAAGCAGGTGGAAGACAAGGCCGCGGGCGACGAGGAGGCCATGCACTACGATGCCGACTACATCC GCGCGCTCGAATACGGCCTACCGCCCACCGCGGGCGAGGGCATCGGCATCGACCGCCTGGTGATGTTCTTCACCGACTCT CCCTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGGCCCGAAAGCTGA Protein sequence : MSELQDENKLVALRREKLGKLRQTGVAFPNDFRRDALAAELRARYGDETAEALEETAVSVKLAGRLMGKRIMGKASFAHI QDMSGRIQIFLQRDGLAEGVYEEFKSWDIGDVIGVEGTVFRTKTGELSVKASNIRLLTKSLRPLPEKFHGLTDAETRYRQ RYLDLLMNEESRRVFQLRSAIVRYIRDFLSERGFIEAETPMMQVIPGGARAKPFVTHHNALGLDLYLRIAPELYLKRLVV GGFEKVFEINRSFRNEGLSTRHNPEFTMIEFYQAYADYRDLMDLTETLMRGIAQNLLGGTVVTHQGKDYDLGRPFRRMTV LESIIHYNPDIRAEDLAERESAAAIAAGLGIPVAAGDGLGKIQTEIFEKTVEDRLDEPTFITAYPAEVSPLARRNDENPF ITDRFEFFVGGRELANGFSELNDPEDQAERFRKQVEDKAAGDEEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMFFTDS PSIRDVILFPHMRPES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-137 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-80 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_112835.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-137 | 59 |
