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Name : MCA0274 (MCA0274) Accession : YP_112808.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Virulence Product : type I restriction-modification system, R subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 258432 - 261440 bp Length : 3009 bp Strand : - Note : identified by similarity to OMNI:NTL01XF02722; match to protein family HMM PF00270; match to protein family HMM PF04313; match to protein family HMM PF04851 DNA sequence : ATGAGCACGACTGACACCAGCGAAAAGGGCCTCGAAGCCCTGATCGTGCGCGACCTGGTCGCCAGCGGCTACGTACAGGG CCATGCCGCGGACTACAACCGCGATGTGGCGCTGGACGTGACCCAGTTGCTCGCCTTTCTTCGGGCGACGCAGCCGAAAG TTGTCGAAACGCTGAACCTGGGCGCCGAAGGCATTCAGCGCACCCAGTTTTTGCACCGCCTGCAGGGCGAGATCACCAAG CGCGGCGTGGTGGACTGTTTGCGCCGCGGTGTTAGCCACGGCCCGGTACACGTGGACCTTTACAAGCTGTTGCCCACCCC GGGCAATGCTGCCGCTGCCGAGGCCTTCGGCAAGAACATTTTCAGCGTCACGCGGCAGGTGCGCTACAGCAACGACGAGT CCCAGCGCGCGCTGGATATGGTGATTTTCATCAACGGCCTGCCGGTGCTCACCTTCGAGCTGAAGAACTCGCTCACCAAG CAGACCGTCGCGGACGCCATCGTGCAGTACCAGACCGATCGCAACCCGGATGAGCTGCTGTTCCAACTCGGCCGCTGCGT TGCCCACATGGCGGTGGACGACGCCGAGGTGCGCTTTTGCACTCACCTGACCGGCAAGACCTCCTGGTTCCTGCCTTTCA ACCAAGGTTGGAACAGCGGCGCAGGCAACCCACCGAATCCTCATGGTCTGAAGACCGACTATCTATGGAAGCAGGTGCTG GTGAAGGAGTCGCTGGCTAACATCATCGAGAACTACGCGCAGCTGGTAGAGGAGGAAGCGGAAGACGCCAATGGCCGCAA GCGCAAGACGCGCAAACAGATCTTCCCCCGGTACCACCAACTTCGCACTGTTCGCGCCCTGTTGCGGCGCAGCCAAGCGG ATGGTGTCGGCAAGCGTTACCTGATCCAGCATTCAGCCGGCAGCGGCAAGAGCAACACGATTGCCTGGCTGGCCCATCAG CTGGTGGAACTGAAGACGGCGGCGGATGCGGGGCAGGCCCAGTTCGACTCCGTCATCGTCATCACCGACCGCCGTGCGCT GGACACGCAGATTGCCCGCACGATCCGGTCCTACGACCATGTGGCCTCGATCTACGGTCATTCGGAAAGCGCCGAGGAAC TGCGCACTTTCCTGCGCCGAGGCAAGAAGATCATCGTCACCACGGTGCAGAAGTTCCCGTTCATCCTGGACGAGCTGGGG GATCTCGGCGACAAGAAGTTCGCGCTGTTGATCGACGAGGCCCACTCCAGCCAGGGCGGCAAGACGACGGCCAAGATGCA TCTGGCCTTGTCCGGACAAGCCGCGGAAGGCGGCGAGGACGAAGAGGAAGAATCGGTCGAGGACAAGGTCAACGCCTTGA TCGAATCCCGCAAGATGCTGGCCAACGCCAGCTACTACGCCTTCACGGCCACGCCCAAGACAAAGACCTTGGAGCTCTTC GGCGAGCGTCAGGTTGTCGGCGACACGGTGCAGTTCCGCTCGCCCGAGGAGCTGACGTATACCACCAAGCAGGCGATTCA GGAAGGCTTCATCCTCGACGTGATCGCCAACTACACCCCGGTGTCGAGCTTCTATCACATTGCCAAGACCGTCGAGCACG ATCCGGAGGTGGACAAAGCCAAGGCGCTGAAGAAGATTCGGCGCTACGTGGAATCCCACGACAAGGCGATCCGTCGCAAG GCGGAGATCATGGTCGATCACTTTATTGAACAGGTGATCGGCGCCAAGAAGATCGGCGGCAAGGCGCGCGCGATGATCGT CTGCAACGGAATCGCACGGGCCATCGACTACTTCCGTGAGGTTTCAGACTACCTTCGCGAGATCAAGAGCCCATACAAGG CCATCGTGGCGTACTCCGGCGATTTCGAGGTCGGCGGGGTGAAGAAGACCGAGGCCGATCTCAACGGATTCCCGAGCAAG GACATTCCGGCCAAGCTCAGGCAAGACCCGTATCGCTTCCTGATCGTCGCGAACAAGTTCGTCACCGGCTTCGACGAGCC GCTGCTGCACACCATGTATGTGGACAAACCCCTGGCGGGCGTCCTGGCCGTGCAGACGCTCTCGCGACTGAACCGCGCGC ATCCGCAGAAGGCCGACACGTTCGTGCTCGACTTCGCCGACAACGCGGAGGCCGTCAAGGCGGCCTTCCAGGAGTACTAC CGCGCCACGATCCAGGAGGGGGAGACCGATCCGAACAAGCTGCACGACCTGAAGAGCGATCTGGACGCCCAGCAGGTCTA CAGCTGGCAACAGGTCGAAGACCTCGTCGCGCAGTACCTTGGCGGAGCGGAGCGGGATCAGCTCGATCCAATCCTCGATG CCTGCGTCGCGGAGTACGTCGAGAAGCTCTCTGAAGACGACCAAGTGAAGTTCAAGGGCAAGGCAAAGGCCTTCGTCCGC AGCTACGGCTTCCTGGCGGCCATTCTGCCCTACGGGCATCCGGCATGGGAGAAGCTGTCGATCTTCCTCAACTTCCTGAT TCCGAAGCTGCCTGCCCCCAAGGAGGAGGATCTGTCCAAGGGTGTGCTGGAGGCCATCGACATGGACAGCTACCGCGCTC AGGCCCAGGCGTCCATGCGCATGGCGATGGATGACGCAGATGCCTTTGTCGAACCTCCACCCCCCGGAGGTAGCGGAGGC AGCGGCGAACCAGAGCTGGACAGGCTGTCGAACATCATCAAGCAGTTCAACGACCTGTTCGGCAACATCGAGTGGCATGA CGCCGACAAGATTCGCAAGGTCGTCACCGAAGAGATTCCGGCGCGCGTCGCGCAGGACAAGGCCTACCAGAACGCACAGG CGAACTCGGGCAAGCAAAACGCCAGGCTGGAGCATGACAAAGCGCTCAACCGCGTGGTGCTGGAGCTGCTCGACGACCAC ACCGAACTCTTCAAGCAGTTCAGCGACAACCCGAACTTCAAGCGCTGGCTGGCGGACATGGTGTTCGACTCGACCTACCG CCCAGGACAGAAACCGTCAGTGCCGCCTCAATCGGGCGCCCAAGCCTGA Protein sequence : MSTTDTSEKGLEALIVRDLVASGYVQGHAADYNRDVALDVTQLLAFLRATQPKVVETLNLGAEGIQRTQFLHRLQGEITK RGVVDCLRRGVSHGPVHVDLYKLLPTPGNAAAAEAFGKNIFSVTRQVRYSNDESQRALDMVIFINGLPVLTFELKNSLTK QTVADAIVQYQTDRNPDELLFQLGRCVAHMAVDDAEVRFCTHLTGKTSWFLPFNQGWNSGAGNPPNPHGLKTDYLWKQVL VKESLANIIENYAQLVEEEAEDANGRKRKTRKQIFPRYHQLRTVRALLRRSQADGVGKRYLIQHSAGSGKSNTIAWLAHQ LVELKTAADAGQAQFDSVIVITDRRALDTQIARTIRSYDHVASIYGHSESAEELRTFLRRGKKIIVTTVQKFPFILDELG DLGDKKFALLIDEAHSSQGGKTTAKMHLALSGQAAEGGEDEEEESVEDKVNALIESRKMLANASYYAFTATPKTKTLELF GERQVVGDTVQFRSPEELTYTTKQAIQEGFILDVIANYTPVSSFYHIAKTVEHDPEVDKAKALKKIRRYVESHDKAIRRK AEIMVDHFIEQVIGAKKIGGKARAMIVCNGIARAIDYFREVSDYLREIKSPYKAIVAYSGDFEVGGVKKTEADLNGFPSK DIPAKLRQDPYRFLIVANKFVTGFDEPLLHTMYVDKPLAGVLAVQTLSRLNRAHPQKADTFVLDFADNAEAVKAAFQEYY RATIQEGETDPNKLHDLKSDLDAQQVYSWQQVEDLVAQYLGGAERDQLDPILDACVAEYVEKLSEDDQVKFKGKAKAFVR SYGFLAAILPYGHPAWEKLSIFLNFLIPKLPAPKEEDLSKGVLEAIDMDSYRAQAQASMRMAMDDADAFVEPPPPGGSGG SGEPELDRLSNIIKQFNDLFGNIEWHDADKIRKVVTEEIPARVAQDKAYQNAQANSGKQNARLEHDKALNRVVLELLDDH TELFKQFSDNPNFKRWLADMVFDSTYRPGQKPSVPPQSGAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 2e-166 | 41 |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 6e-167 | 41 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 6e-167 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MCA0274 | YP_112808.1 | type I restriction-modification system, R subunit | VFG1098 | Protein | 3e-167 | 41 |
