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Name : amt-1 (MCA0268) Accession : YP_112802.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 255158 - 256453 bp Length : 1296 bp Strand : + Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGGGGCAAGGTCCGAAATTCTTCGGTTTCAGCTTGTTGGGATGTCTGCTGGTGGCGCGGCCGCTCGAGGCGGCGGAGCT CGAGGCAGCGGATACCGCTTGGATTCTCACATCGACCGGCTTCGCCTGGTTCATGACGGTGCCGGGGTTGGCCTTGCTTT ACGCCGGCCTGGTCCGCACCAAGAACGTACTCTCCGTCCTGGCCCAGTGTTTTGCCGTCGCCGCCCTGGTGTCTCTGGTC TGGATGGGCGCCGGCTACAGCCTCGCCCTGGGTGGGGGGGAGTCCTCGTCGCCATGGCTCGGCGGCACGTCCAGGCTGTT CCTGCACGGTCTGACGGCCGACTCGGCGGTCGGGCCCGTTTCGGAAGCGGCGTACTGCATCTACCATCTCGGCTTCGCCG TACTGGCGCCGACGGTCATGGTCGGTGGCTTCGCCGAGAGGATGAAGTTCTCGGCCATGCTTTGGTTCACCACCCTGTGG ATGCTGCTGGTCTATGCGCCGGTCTGCCACTGGCTGTGGGGCGGCGGCTGGCTGGCCCGTCTCGGTGCGGCGGACTTCAG CGGCGGGGTGGTGGTCCATGCGACCGCCGGCGTCTCGGCGCTCACGGCCGCCTGGCTGGTGGGGCCGCGGCGTGGGTTTC CGGATGCGCTCATGCCGCCCCACAATCTGACCCTGACGGCGGCCGGCGCCGGGATGCTGTGGATCGGCTGGCACGGCTTC AGTGCCGGCAGCGCCTTGATCACCAACGGTGCGGCGGCACTCTCGATGTTGAACACCCACTTGGCCGCTTCCGCCGGCGC GATGGTCTGGATGGTGGCCGAGTGGTGGCGCTTCGGTCGCCCCACGCTGCTCGGACTGGTGACCGGCATGATCGCCGGCC TGGTCGCGCTGTCGCCCGCGGCGGGTTACCTCGGGCCGCAGGGTGCCGTCATCGTCGGTGGCGCGGGCGGGCTGGCCTGT TTCTTCGCGATCCCCTGGATCCGGCGCAGGCTGGAAATCGACGATGCCATGGACGTGTTCCCGGTGCATGCGGCCGGCGC CCTGCTGGGCGTGCTCCTCACCCCCTTGGTCGCCGGCGGGGCTTGGGGCGGTTCGGGATTTCCGGGTGATTTGGGGGTGG GGCAGCGGATCGGCGTTCAGCTCGTCGCGATCGCTGCCGCCGGAGTTTGGAGCGGAACCGTCAGCTATTTCATACTCAAA GGTCTGAACCGTTGGCCGGGACTGCGCGTCGGCCCCGACGAGGAGACCGAAGGACTGGACTTGAGTTCGCACAACGGCAA GGGCTATTACTTCTGA Protein sequence : MGQGPKFFGFSLLGCLLVARPLEAAELEAADTAWILTSTGFAWFMTVPGLALLYAGLVRTKNVLSVLAQCFAVAALVSLV WMGAGYSLALGGGESSSPWLGGTSRLFLHGLTADSAVGPVSEAAYCIYHLGFAVLAPTVMVGGFAERMKFSAMLWFTTLW MLLVYAPVCHWLWGGGWLARLGAADFSGGVVVHATAGVSALTAAWLVGPRRGFPDALMPPHNLTLTAAGAGMLWIGWHGF SAGSALITNGAAALSMLNTHLAASAGAMVWMVAEWWRFGRPTLLGLVTGMIAGLVALSPAAGYLGPQGAVIVGGAGGLAC FFAIPWIRRRLEIDDAMDVFPVHAAGALLGVLLTPLVAGGAWGGSGFPGDLGVGQRIGVQLVAIAAAGVWSGTVSYFILK GLNRWPGLRVGPDEETEGLDLSSHNGKGYYF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 1e-54 | 41 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 1e-54 | 41 |
