|
Name : lspA (MCA2254) Accession : YP_114672.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : signal peptidase II Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0597 EC number : 3.4.23.36 Position : 2444870 - 2445346 bp Length : 477 bp Strand : + Note : identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077 DNA sequence : TTGAGATCGTCCATGTTGAAATGGCTTTGGCTGTCGGTGCTGGTCTTCGCACTCGACCAGCTCAGCAAGCAGATCGTCGA CGCATCGATGCGGCTGTATGAGACGATCCCGCTGCTGCCGGTGTTCCAGCTCACCTACCTGCGCAACCAGGGCGCTGCGT TCAGCTTCCTGAGCGAGGCCGGCGGTTGGCAGCGCTGGTTTTTCATCGCCCTGTCGGCCAGCGCCACGCTGCTGATCACC TACTGGCTCAAGCACATGGACCGGCGGAAAACCTGGGAAGCCGCCGCCTGGGCCCTGGTGCTGGGCGGTGCCGTCGGCAA CCTGCTGGACCGGATCGTCTACGGCTACGTCATCGACTTTCTCGACGTGTTCTACGGCGACTGGCACTGGCCGGCGTTCA ACGTCGCCGACTCGGCCATCACCGTCGGTATCGGCATGCTGCTGATCGATTCGTTCCGGGGCCGCGCGAACGCCTGA Protein sequence : MRSSMLKWLWLSVLVFALDQLSKQIVDASMRLYETIPLLPVFQLTYLRNQGAAFSFLSEAGGWQRWFFIALSASATLLIT YWLKHMDRRKTWEAAAWALVLGGAVGNLLDRIVYGYVIDFLDVFYGDWHWPAFNVADSAITVGIGMLLIDSFRGRANA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lspA | ADI24143.1 | lipoprotein signal peptidase | Not tested | AbaR1 | Protein | 1e-09 | 46 |
| lspA | ACS32043.1 | lipoprotein signal peptidase | Not tested | AbaR5 | Protein | 2e-09 | 46 |
| lspA | CAJ77023.1 | lipoprotein signal peptidase | Not tested | AbaR1 | Protein | 1e-09 | 46 |
| lspA | AAN62189.1 | putative lipoprotein signal peptidase LspA | Not tested | PAGI-2(C) | Protein | 1e-14 | 44 |
| SE0072 | NP_763627.1 | lipoprotein signal peptidase | Not tested | SCCpbp4 | Protein | 4e-06 | 42 |
| ACICU_00236 | YP_001844895.1 | lipoprotein signal peptidase | Not tested | AbaR20 | Protein | 6e-10 | 41 |
| lspA | ACN81031.1 | lipoprotein signal peptidase | Not tested | AbaR5 | Protein | 6e-10 | 41 |
| lspA | CAJ77096.1 | Lipoprotein signal poeptidase | Not tested | AbaR1 | Protein | 4e-10 | 41 |
| lspA | ADZ05771.1 | lipoprotein signal peptidase | Not tested | AbaR11 | Protein | 4e-10 | 41 |
| lspA | AGK36655.1 | lipoprotein signal peptidase | Not tested | AbaR26 | Protein | 4e-10 | 41 |
