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Name : kdpB (MCA2216) Accession : YP_114636.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 2392257 - 2394329 bp Length : 2073 bp Strand : - Note : identified by similarity to SP:P03960; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497 DNA sequence : ATGATTCATCAAACCGCGAAACAAGGCCTGTTCGACCGCGAGATCCTCGCGGAGGCTTTGCTGGACTCGTTCCGCAAGCT GGCGCCGCGGACACAGTTGAAGAACCCGGTGATGTTCGTCGTCTACGTCGGCAGCCTGCTGACGACGGTGTTGTATGTTC AGTCCCTGGTCGGTCAGGGGGAGGCGTCTTCGGGATTCATCCTGGCGATCACGCTCTGGCTCTGGTTCACCGTGCTGTTC GCCAATTTCGCCGAGGCGCTGGCCGAAGGCCGGGCCAAGACCCAGGCTGCATCCCTGCGCAGCACCAGGCGCGACGTCAT GGCGAAGAAGCTGGACGAACCGCGCTATGGCGCCAACTACAGCAAGGTCCCGGGGTCGAGCCTGCGCCGCGGAGACGTGG TGCTGATCGAGGCCGGCGATTTCGTCCCTGCCGACGGCGAGGTGATCGAAGGGGTGGCTTCGGTCAACGAAAGCGCCATT ACGGGTGAGAGTGCGCCGGTGATCCGCGAATCCGGCGGGGACTTCAGCGCGGTCACCGGAGGCACGCGGGTACTGTCGGA CTGGCTGGTGGTGCGGATCACGGTCAATCCGGGCGAGGCCTTCCTCGACCGCATGATCGCCATGGTCGAAGGCGCCAAGC GTCAGAAGACCCCGAACGAGATCGCCCTGACCATTTTGCTGGTGGCGCTCACCCTGATTTTCCTGATGGCGACCGCGACC CTGCTGCCGTTTTCGGTCTACAGCGCGGAAACGGCCGGCGAGGGCCAGCCGATCATGGTCACCGTCCTGGTCGCGCTCTT GGTGTGCCTGATTCCCACCACGATCGGCGGCCTGCTCTCGGCCATCGGCGTGGCCGGCATCGGCCGGATGATGCGCAAGA ATGTGATCGCCACCTCGGGCCGGGCGGTGGAGGCGGCGGGGGACGTGGACGTGCTGCTGCTCGACAAGACCGGCACCATC ACGCTCGGCAACCGCCAGGCATCGGCCTTCCTGCCGCTGCAGGGGATCGGCCGGCAGGAATTGGCCGACGCCGCGCAGCT GGCGTCGCTGGCGGACGAGACGCCGGAAGGCCGCAGCGTGGTGGTGCTGGCCAAGCAGATGTACGGCTTGAGGGAACGGG ACGTGCGTACCCTGGGCGCCACCTTCGTGCATTTCAGCGCCCAGACCCGCATGAGCGGCGTGAACCTCGAAGGTCGCCAG ATCCGCAAGGGGGCGGCCGATGCGATCCGCGTCTACGTGGAGGAGCAGGACGGCAGTTTCCCCGAGGAAGTACAGAAGCT GGTCCATGATGTGGCGCGGCGCGGCAGCACGCCGCTGGTGGTCGCCGAAAATGGGCGGGTGCTGGGCGTGATCGAGCTGA AGGACATCGTCAAGGGCGGCATCAAGGAGCGCTTCGTCGAACTGCGCCGGATGGGGATCAAGACGGTCATGATCACCGGC GACAATCCGCTGACCGCGGCCGCCATCGCCGCCGAGGCCGGGGTGGACGATTTCCTGGCGGAGGCGACGCCCGAGGCCAA GCTCAAGCTGATCCGCAGCTACCAGGCGGAAGGCCGGTTGGTGGCGATGACCGGTGATGGTACCAACGACGCCCCGGCCC TGGCCCAGGCCGACGTGGCCGTGGCGATGAACACGGGCACACAGGCTGCCAAGGAGGCCGGCAACATGGTGGACCTGGAT TCCAATCCCACCAAACTCATCGAGATCGTGGAGACAGGCAAACAGATGCTGATGACCCGTGGCGCGCTGACCACCTTCAG CATCGCCAACGACGTGGCGAAGTATTTCGCCATCATCCCGGCGGCGTTCGCGAGCACGTATCCGGCGCTGAATGCGCTCA ATGTCATGGGGCTCGCAACGCCCGCCAGCGCCATCCTCTCGGCGGTGATCTATAACGCCCTCATCATCGTCGCGCTCATT CCGCTGGCGCTGAGGGGAGTGAGCTACAAGCCGGTGGGCGCTTCGGCGCTGCTGCGCAACAACTTGCTGATCTATGGCGT CGGCGGCCTGGTCGTACCCTTCATCGGCATCAAGCTGATCGACCTGCTGCTCGTCGCCCTGGATCTGGTTTAG Protein sequence : MIHQTAKQGLFDREILAEALLDSFRKLAPRTQLKNPVMFVVYVGSLLTTVLYVQSLVGQGEASSGFILAITLWLWFTVLF ANFAEALAEGRAKTQAASLRSTRRDVMAKKLDEPRYGANYSKVPGSSLRRGDVVLIEAGDFVPADGEVIEGVASVNESAI TGESAPVIRESGGDFSAVTGGTRVLSDWLVVRITVNPGEAFLDRMIAMVEGAKRQKTPNEIALTILLVALTLIFLMATAT LLPFSVYSAETAGEGQPIMVTVLVALLVCLIPTTIGGLLSAIGVAGIGRMMRKNVIATSGRAVEAAGDVDVLLLDKTGTI TLGNRQASAFLPLQGIGRQELADAAQLASLADETPEGRSVVVLAKQMYGLRERDVRTLGATFVHFSAQTRMSGVNLEGRQ IRKGAADAIRVYVEEQDGSFPEEVQKLVHDVARRGSTPLVVAENGRVLGVIELKDIVKGGIKERFVELRRMGIKTVMITG DNPLTAAAIAAEAGVDDFLAEATPEAKLKLIRSYQAEGRLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLD SNPTKLIEIVETGKQMLMTRGALTTFSIANDVAKYFAIIPAAFASTYPALNALNVMGLATPASAILSAVIYNALIIVALI PLALRGVSYKPVGASALLRNNLLIYGVGGLVVPFIGIKLIDLLLVALDLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-175 | 64 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-175 | 64 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-135 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-135 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-135 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-135 | 55 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-135 | 55 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-136 | 55 |
