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Name : amt-3 (MCA2136) Accession : YP_114562.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 2299172 - 2300614 bp Length : 1443 bp Strand : - Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGAAAAACATTCCGACTTCCCTGGTGACTCTGGCGTGTCTCGGTTTCAGTGCCGCCGCGCAGGCCGAAGGCGCCACCGA GATCGTCGAGACCGTGGTCGAGACGGTGCAGCAGGCCGCTACCCCCGCCGTTCCGACCCCGGACAAGGGTGACACGGCCT GGATGATCGTCGCCACGGTGCTGGTGACCCTAATGGTCATTCCGGGGCTGGCGTTGTTCTATGGCGGTATGGTCCGCGCC AAGAACATGCTGTCTGTGCTGATGCAGGTCTTCGTGATCTTTTCGCTGATGGCCGTACTCTGGGCCGTCTACGGTTACAG CATCGCGTTTACCGAAGGGGGCGTCTTCTTCGGCAGTCTGGACAAGGCCTTCCTCGCCGGCGTGACGCCCGATTCGACCG CCGCCACCTTCAGCAAGGGTGTGGTGATCCCCGAACTGATCTACGTCGCGTTCCAGTTGACCTTCGCCTGCATCACGCCG GCCCTGATCGTCGGTGCCTTTGCCGAGCGCATGAAGTTCAGCGCGGTGCTGCTGTTCATGGTGTTGTGGTTCACCTTCTC CTATCTGCCGATCGCCCACATGGTGTGGTACTGGGCCGGCCCCGACGCCTACACCGATGCCGCGGCGGGTGAAAAGGCGA CCGCTACCGCCGGCTTCCTGTTTCAAAAGGGTGCGCTGGATTTCGCCGGCGGCACCGTGGTTCACATCAATGCGGGCATC GCCGGCCTGGTAGGCTGTCTGCTGGTGGGTAAACGCATCGGCTACAAGAAGGAGTCGATGGCGCCGCACAGCGTTCCTAT GACCATGATCGGCGCCTCGCTCCTTTGGGTCGGTTGGTTTGGCTTCAACGCCGGTTCCAACCTGGAGGCCACCGGTACCG CGGCTTTGGCCTTCGTCAACACCATGCTGGCCACCGCCGCCGCGACGCTGGCGTGGTCGGCCGTCGAATGGATCGCGCGC GGCAAGCCCAGCATGCTGGGCGGTGCTTCGGGTGCGGTCGCCGGCCTGGTGGCCATCACGCCGGCCTGCGGGTTCATCGG TCCGATGGGTTCGATCGTGCTGGGTTTGGCGGCCGGCGCGGTGTGCTTCTGGTCCGTGACCACCCTCAAGAATGCGCTGG GCTATGACGACTCGCTCGACGTGTTCGGTGTCCACGGCGTGGGCGGTATCATCGGCGCGCTGGGCACCGGCATCTTCGCC TCTCCCGCCCTCGGCGGTGCCGGGGTCTACGACTATGTGGCCAACGCCGTCGCCGAATACGACATGGTGAGCCAGGTCAT CAGCCAGTCCTGGGGCGTGGGCGTCACCATCGTCTGGAGCGGCGTGGTCTCCCTGATCGCCTACAAGATCGTCGATCTGC TCGTCGGCCTTCGGGTTTCCGAGGAGACCGAGCGTGAGGGATTGGACATCCGTGAGCACGGCGAAACCGCCTATCACCCC TGA Protein sequence : MKNIPTSLVTLACLGFSAAAQAEGATEIVETVVETVQQAATPAVPTPDKGDTAWMIVATVLVTLMVIPGLALFYGGMVRA KNMLSVLMQVFVIFSLMAVLWAVYGYSIAFTEGGVFFGSLDKAFLAGVTPDSTAATFSKGVVIPELIYVAFQLTFACITP ALIVGAFAERMKFSAVLLFMVLWFTFSYLPIAHMVWYWAGPDAYTDAAAGEKATATAGFLFQKGALDFAGGTVVHINAGI AGLVGCLLVGKRIGYKKESMAPHSVPMTMIGASLLWVGWFGFNAGSNLEATGTAALAFVNTMLATAAATLAWSAVEWIAR GKPSMLGGASGAVAGLVAITPACGFIGPMGSIVLGLAAGAVCFWSVTTLKNALGYDDSLDVFGVHGVGGIIGALGTGIFA SPALGGAGVYDYVANAVAEYDMVSQVISQSWGVGVTIVWSGVVSLIAYKIVDLLVGLRVSEETEREGLDIREHGETAYHP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 2e-74 | 48 |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 2e-74 | 48 |
