Gene Information

Name : MCA1764 (MCA1764)
Accession : YP_114203.1
Strain : Methylococcus capsulatus Bath
Genome accession: NC_002977
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1892803 - 1893477 bp
Length : 675 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAGGATTCTGCTCGTCGAAGACGACGAAACCCTGGCCGACGGCCTGTCGCGCAGCCTGGCCGAGGATGGCTTCGACCT
CACCGTTGCCGCGACGGGAACCTACGCCGACAGTGCCCTGCGCACCCAGGACTACGATCTGGTCATCCTCGACCTCGGCC
TGCCCGACATCGACGGGAAAGAAGTCCTCAGGCAGTTGCGGGTCAGAAAATCGCCGGTGCCGGTCCTCATCCTGACGGCC
CGGGACGGGCTGGACGACCGGATCGGCGGTCTGGAGCTGGGCGCCGACGATTACATGACCAAGCCTTTCGAGCTGAGGGA
ACTGGAGGCGCGGGTGCGGGCGCTGATCCGGCGCAGCCACGGCGGCTTCGGTCACGACATCGTCTGCGGCCCGCTCGTTC
TCAATACGTTCGACCGCCAGGTTCACGTGAACGGAGAACCGATGCTTCTGCCTTCCCGCGAATATGGCGTGCTGGAGGCG
CTGCTGCTGCAGGCGGGCCGGGTGGTCAGCAAGGACCGGATCGCCCTGCGTCTGGCGAGCGGCGGGGATGAACTGGCGGA
CAACGCGATCGAGGTCTACGTGCACCGTCTGCGCCGCCGCCTCGACGATCTCGGCATTCGCATCAGGACGGTGCGCGGCC
TCGGCTACCTGCTGGAACGGCCCGCCGGTGAATAA

Protein sequence : 
MRILLVEDDETLADGLSRSLAEDGFDLTVAATGTYADSALRTQDYDLVILDLGLPDIDGKEVLRQLRVRKSPVPVLILTA
RDGLDDRIGGLELGADDYMTKPFELRELEARVRALIRRSHGGFGHDIVCGPLVLNTFDRQVHVNGEPMLLPSREYGVLEA
LLLQAGRVVSKDRIALRLASGGDELADNAIEVYVHRLRRRLDDLGIRIRTVRGLGYLLERPAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MCA1764 YP_114203.1 DNA-binding response regulator BAC0487 Protein 1e-32 43
MCA1764 YP_114203.1 DNA-binding response regulator BAC0083 Protein 2e-28 43
MCA1764 YP_114203.1 DNA-binding response regulator NC_002516.2.879194.p Protein 2e-28 41
MCA1764 YP_114203.1 DNA-binding response regulator Y16952.3.orf35.gene. Protein 4e-19 41
MCA1764 YP_114203.1 DNA-binding response regulator AE000516.2.gene3505. Protein 6e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MCA1764 YP_114203.1 DNA-binding response regulator VFG0473 Protein 1e-33 43