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Name : MCA1713 (MCA1713) Accession : YP_114152.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Virulence Product : sigma-54 dependent DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1828656 - 1830038 bp Length : 1383 bp Strand : - Note : identified by similarity to OMNI:NTL01ST2559; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199 DNA sequence : ATGAGTGAAGCGCGCAAGCGAGTGTTGCTGGTGGACGACGATCCCGACCTGTTGCGTCTGATCGGGCTGCGCCTGACCGC GGCGGGGTTCGATGTGGCGAAAGCGGCGAACGGCCAGTCGGCACTGTCGCAGGTAGTGGTCTTCCGGCCCCATGTCGTCG TCACCGATCTGAGGATGGACGGTATGGACGGCATGGCATTGTTCGACGCCTTGAACGAACGCCATCCCACCTTGCCAGTG ATCATCATGACGGCACACGGTACCATCAACGACGCAGTCGCGGCGACCCGGCGGGGCGTATTCGGATTCGTCACCAAGCC GGTGGACAAGAACGAACTGATTGAGCACATCTCCGAAGCGATCCGCATCAACGGAAACACGACCGTCATTCCCGACAAGG AGGAGTGGCGCGCCCGGATCGTCACCCAGAGCCCTTTGATGGAAGAGGTCCTGGGGCAGGCCCAGCGTGTGGCCCAGAAC CGGGCCAGCGTGTTCATCGGTGGTGAAAGCGGTACCGGCAAGGAACTGCTGGCTCGGGCCATTCACGACCTCAGTCCTCG TGCCAAGGGGCCGTTCGTGGCGGTCAATTGCAGCGCCATCCCGGAAAATCTGCTCGAGTCCGAGCTGTTCGGTTACCGCA AGGGGGCGTTCACCGGGGCGACGCGGGACCACCAGGGCCTGTTCAAAGCGGCCGACGGTGGCACGCTGTTCCTGGATGAA GTCGGTGACATGCCACGATCCTTTCAGGTGAAACTGTTGCGCGCCCTTCAGGAGATGAAGGTGCGTCCCGTCGGAGCGAC CCATGACGAGCCGGTCGACGTCCGGGTGATCTCGGCCACCCATGTCGACCTTGAACAGGCGATGGCGGAGGGGAACTTCC GCGAGGATCTGTATTACCGCCTCAACGTCGTGACCCTGCTGTTGCCGCCCCTGGTCAAACGTCCCGAGGACATTCCCTTG CTGGCCATGCATTTTCTTCGGGAGCTGGTGAGTTCGTACGGCGACCAGGTCAAGGGCTTCTCTCCGGAGGCGATGGAGGC GCTGGTGAATTTTCAGTGGCCCGGCAACGTCCGGCAACTGCGCAACGTGGTGGAACAGTGCGTGGCGCTGTCGACCACGC CACTGATCCCCGTGACCCTGGTGCAACGTGCTTTGCGGGAGGCGCCGTCGTCTTTCCCTTCGTTGCAGGAAGCCAGGGAC CAGTTCGAACTCAACTACCTCATCCGCCTATTGCAGATGACCCGAGGGAACGTGACCCAGGCCGCCCGTCTGGCTAAGCG CAACCGTACCGAGTTTTACCGGCTCCTGAGCCGGCATGGCATGAATCCGGCGATGTTCAAGGGAGGCGGAGATGCCGCCG GCGATGCGCAGCCGCCTTCGTGA Protein sequence : MSEARKRVLLVDDDPDLLRLIGLRLTAAGFDVAKAANGQSALSQVVVFRPHVVVTDLRMDGMDGMALFDALNERHPTLPV IIMTAHGTINDAVAATRRGVFGFVTKPVDKNELIEHISEAIRINGNTTVIPDKEEWRARIVTQSPLMEEVLGQAQRVAQN RASVFIGGESGTGKELLARAIHDLSPRAKGPFVAVNCSAIPENLLESELFGYRKGAFTGATRDHQGLFKAADGGTLFLDE VGDMPRSFQVKLLRALQEMKVRPVGATHDEPVDVRVISATHVDLEQAMAEGNFREDLYYRLNVVTLLLPPLVKRPEDIPL LAMHFLRELVSSYGDQVKGFSPEAMEALVNFQWPGNVRQLRNVVEQCVALSTTPLIPVTLVQRALREAPSSFPSLQEARD QFELNYLIRLLQMTRGNVTQAARLAKRNRTEFYRLLSRHGMNPAMFKGGGDAAGDAQPPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 1e-57 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 1e-57 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MCA1713 | YP_114152.1 | sigma-54 dependent DNA-binding response regulator | BAC0467 | Protein | 3e-68 | 44 |
| MCA1713 | YP_114152.1 | sigma-54 dependent DNA-binding response regulator | BAC0089 | Protein | 2e-70 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MCA1713 | YP_114152.1 | sigma-54 dependent DNA-binding response regulator | VFG0116 | Protein | 2e-51 | 42 |
