Gene Information

Name : MCA1400 (MCA1400)
Accession : YP_113858.1
Strain : Methylococcus capsulatus Bath
Genome accession: NC_002977
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1487596 - 1488255 bp
Length : 660 bp
Strand : -
Note : identified by similarity to OMNI:VCA0782; match to protein family HMM PF00005

DNA sequence :
ATGGCGAGACAGGTGGACAAGTGGGTCGTAAGCGCCGGTGAAAGACTGGATATCTTGACAGGTGTGGACCTGGCGATCAA
ACCGGGTGAGAGCGTCGGGATCGTCGGAACCTCCGGCTCCGGCAAGTCGACTCTGCTCGGTCTGCTCGCCGGCCTCGACC
GACCGTCTGCGGGCGAGATCGAGCTTGCCGGCTGCCGCCTTTCGCAACTGGACGAAGATGGTTTGGCACGGCTGAGGGCG
CGGCACGTCGGTTTCGTGTTCCAGTCGTTCCAGCTTCTGCCCAGCTTCACCGCCCTGGAAAATGTCATGCTGCCGCTGGA
ACTCGGCGGTCGTCTCGACGAAGCCCGGGACCGCGCCCGGGGACTCTTGGCCCGGGTCGGCCTCCAGCATCGCCTGGGGC
ATTATCCCCGCCAGCTCTCCGGCGGGGAGCAGCAGCGAGTGGCCCTTGCGCGCGCCTTCGTCACGGTGCCGGACATCCTC
TTCGCCGACGAGCCGACCGGAAATCTCGACGACCGTACCAGCCAGACCATCATCGATATGCTGTTCGACCTCAACCGCGA
GCATCGCACCACGCTGGTCCTGGTGACGCACGATGCCCGTCTCGCTTCGCGTTGTGATCGCCTGCTCCGGCTGGAGGCCG
GGCGGATGCTCGAGTCATGA

Protein sequence :
MARQVDKWVVSAGERLDILTGVDLAIKPGESVGIVGTSGSGKSTLLGLLAGLDRPSAGEIELAGCRLSQLDEDGLARLRA
RHVGFVFQSFQLLPSFTALENVMLPLELGGRLDEARDRARGLLARVGLQHRLGHYPRQLSGGEQQRVALARAFVTVPDIL
FADEPTGNLDDRTSQTIIDMLFDLNREHRTTLVLVTHDARLASRCDRLLRLEAGRMLES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-24 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-25 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-12 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MCA1400 YP_113858.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-27 48
MCA1400 YP_113858.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-29 44
MCA1400 YP_113858.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-28 43