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Name : MCA1268 (MCA1268) Accession : YP_113731.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1352056 - 1353678 bp Length : 1623 bp Strand : + Note : identified by similarity to OMNI:NTL03PA01808; match to protein family HMM PF00005 DNA sequence : ATGAGCGGTCCCTTGCTGCAGGTCGAGAATCTCAAGGCGGGCTTCGTCCAGGGCGGGCAGATGACCAAGGCCGTCGGCGG TGTGTCCTTCACCATCGATCGGGGTGAAACCTTTGCCCTGGTCGGCGAATCCGGTTCCGGCAAGTCGGTAACGGCGCTCT CCGTGCTGCGCCTGCTGCCGCAGAACGGCAGGATCATCGACGGCAAGGTGATCCTCAGGGGTCGTAATCTGTTCGCCCTG CCCGAGGTATCGATGAGCTCGATCCGGGGCCGGCGCATCGGCATCGTCTTCCAGGACCCGCAGAGCTCGCTCAATCCGGT CATGAGCATAGGCCAGCAGGTCGGCGAAGTGTTGCGGCTGCACAAACGGCTCAACGGTGGCGCGCTCCAGGCACGGGTGA TCGAATTGCTGGGCCTGGTCGGTCTGCCCCGGCCCGAACGGCATTTCACCGAATATCCGCACCAGCTTTCCGGCGGCATG CGCCAGCGCGTGATGATCGCCATCGCCCTGGCGGGCGAGCCGGACCTTCTGATCGCCGACGAACCGACCACGGCGCTGGA CGTCACGGTGCAGGCGCAGATCCTCGGGCTGCTCAAGCGTCTGCAGCGGGAGACCGGCATGGCGCTGTGGCTGATCACCC ACGACCTCGGCATCGTCCACGACCTGGCAGACCGCATCGCAGTGATGCGCAACGGCTTGATCGTCGAAGAGGCCCGCCGG GACGAATTCTTCAGACAGCCGCGGCATCCTTACAGCCGCCAGTTGCTCGATGCCCTGCCCAGGCTGAGCGATTGCGTCGG GCGCGAGCCGGTGGCGCAAGCGGGACGTCCCTTGCTGGAGGTCAGCGATTTCAAGGTGCACTACCCGGTCCGGAAGGGTC TGTTCCGGCGTGTGGTCGATCATGTGCGGGCGGTGGACGGCGTGTCCTTCAGCCTGTGGGCGGGGGAAACTCTGGCCCTG GTGGGCGAATCCGGTTGCGGCAAGACCACGCTGGGCAAGGGCATCCTCAACCTGATCGAGTCCTCCGGCGGCCGGGTGAC ATTCGACGGCGCCGACGTCACCGCCGCCCGCGGCGGGCAGCGCCGGGCGCTGTGTCGGGCCATGCAGATCGTGTTCCAGG ATCCGCATGCCGCGATGAATCCGCGCATGATCGTGGGCGACATCATCGAAGAAGGAATGAAGGCAGTGATGCCGGAAATG AGTGCCGTTCAGCGCCGCAAGCGGATGGAGTTCCTGCTGGAATCGGTCGGTTTGAGCCCGGAAAGCCGGCTGCGCTATCC CCACGAATTTTCCGGCGGCCAGCGCCAGCGCATCTGCATTGCCAGAGCGCTGGCGGTCGAGCCGCGCCTCATCGTTTGCG ATGAGCCGACCAGCGCGCTGGACGTTTCGGTCCAGGTGCAGATCCTGGGCTTGCTCAAGGATCTGCAGAAGAGGGAGAAG CTCGGTTTTCTGTTCATCACTCACGACCTCGGCGTCGTTGCCGATATCGCCCACCGGGTTGCCGTCATGTGCAGCGGCCG GATCGTCGAAACCGGGCCGACCGAACAGGTGTTGCTGCGGCCACAGCACCCCTACACCCGGACTTTGCTCGAGGCATTAC CCGGGCTGCGGAAAGTCTCTTAG Protein sequence : MSGPLLQVENLKAGFVQGGQMTKAVGGVSFTIDRGETFALVGESGSGKSVTALSVLRLLPQNGRIIDGKVILRGRNLFAL PEVSMSSIRGRRIGIVFQDPQSSLNPVMSIGQQVGEVLRLHKRLNGGALQARVIELLGLVGLPRPERHFTEYPHQLSGGM RQRVMIAIALAGEPDLLIADEPTTALDVTVQAQILGLLKRLQRETGMALWLITHDLGIVHDLADRIAVMRNGLIVEEARR DEFFRQPRHPYSRQLLDALPRLSDCVGREPVAQAGRPLLEVSDFKVHYPVRKGLFRRVVDHVRAVDGVSFSLWAGETLAL VGESGCGKTTLGKGILNLIESSGGRVTFDGADVTAARGGQRRALCRAMQIVFQDPHAAMNPRMIVGDIIEEGMKAVMPEM SAVQRRKRMEFLLESVGLSPESRLRYPHEFSGGQRQRICIARALAVEPRLIVCDEPTSALDVSVQVQILGLLKDLQKREK LGFLFITHDLGVVADIAHRVAVMCSGRIVETGPTEQVLLRPQHPYTRTLLEALPGLRKVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-99 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-80 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-80 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-80 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-80 | 43 |
