|
Name : MCA1219 (MCA1219) Accession : YP_113683.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : ISMca5, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 1284430 - 1285665 bp Length : 1236 bp Strand : - Note : identified by match to protein family HMM PF00872 DNA sequence : ATGCCAAGCAAGAAGAAACCGGCGGCAGCCGGCATGACGGCGCTGCCGTCTATTCCCCACGAGCTCATTGAACAATTGAC CGGCGGCGCCACGCCGATGACGGCCGAACAGATCAACGCCACCACCATGGCGCTGAAGAAAGCGCTGATCGAGCGTGCGC TGGGCGCAGAGCTGTCGTACCACCTGGGCTATCCGCCCGGCAGCGCCCGCCCCGAGGATGCAGCCAACCAGCGCAACGGC AAGTCCGCCAAGACGGTGCTGACTCAGGACGGGCCGCTGCGCATCGAGGTGCCGCGCGACCGCGCAGGCTCCTTCGAGCC CATCCTGATCCCCAAGCACGAGCGGCGTTTCACGGGCTTTGACGACAAGATCGTGGCCATGTACGCGCGGGGCATGACCG TGCGTGAGATCCAGGGCTTCCTGGCTGAGCAGTACGGCACCGAGGTCAGTCCTGAATTCATCAGTTGTGTCACGGATGAG GTGATGGCCGAGGTCACCGCCTGGCAGGGCAGGCCGTTGGAGCCGATGTACCCGGTCGTATTCTTCGACTGTCTGCGGGT CAAGATCCGCGAGGATGCCGTGGTGCGCAACAAGGCCATCTATCTGGCGCTGGGCGTGCTGCCCGACGGTACGCGCGACA TCCTGGGCCTGTGGATCGAGAACACCGAAGGGGCCAAGTTCTGGATGAAGGTGTTCAACGATCTGAAGACGCGCGGCGTG GCCGACATCCTGATTGCCGTCACCGACGGGCTCAAGGGCATTCCCGAGGCGCTTGGGGCGGTGTTTCCGGCCACGACGCT GCAGACCTGTATCGTGCACTTGATCCGCAACAGCCTGGACTATGCCAGCTGGAAGGACCGCAAAGCGCTGGCTGCGGCGC TCAAGCCCATCTACACGGCGCCCAGCGCAGAAGCCGCAGCGGTCGAACTCGATGCCCTGGAGGCTGGCCCCTGGGGGCAG AAGTTCCCCACGGTGGTGGCGACCTGGCGCCGGGCCTGGGACCGCGTCATTCCGTTTTTTGCGTTCAGCCCGGCGGTGCG CAGAGTGATCTACACGACCAATGCCATCGAGAGCCTGCACAGTCAGCTGCGCAAGATCATCAAGACGCGGGGGCACTTTC CCAATGACGAGGCCGCCACCAAGCTGCTGTGGCTGGCCTTGCGCAACATCACGGCTGACTGGGGCCGAGCAGCCAGGGAG TGGAAAGACGCCATGAACCAGTTCGCCATCGCCTAG Protein sequence : MPSKKKPAAAGMTALPSIPHELIEQLTGGATPMTAEQINATTMALKKALIERALGAELSYHLGYPPGSARPEDAANQRNG KSAKTVLTQDGPLRIEVPRDRAGSFEPILIPKHERRFTGFDDKIVAMYARGMTVREIQGFLAEQYGTEVSPEFISCVTDE VMAEVTAWQGRPLEPMYPVVFFDCLRVKIREDAVVRNKAIYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGV ADILIAVTDGLKGIPEALGAVFPATTLQTCIVHLIRNSLDYASWKDRKALAAALKPIYTAPSAEAAAVELDALEAGPWGQ KFPTVVATWRRAWDRVIPFFAFSPAVRRVIYTTNAIESLHSQLRKIIKTRGHFPNDEAATKLLWLALRNITADWGRAARE WKDAMNQFAIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 5e-82 | 47 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 3e-90 | 45 |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 5e-82 | 45 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 1e-76 | 44 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 3e-78 | 44 |
