Gene Information

Name : MCA1219 (MCA1219)
Accession : YP_113683.1
Strain : Methylococcus capsulatus Bath
Genome accession: NC_002977
Putative virulence/resistance : Unknown
Product : ISMca5, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 1284430 - 1285665 bp
Length : 1236 bp
Strand : -
Note : identified by match to protein family HMM PF00872

DNA sequence :
ATGCCAAGCAAGAAGAAACCGGCGGCAGCCGGCATGACGGCGCTGCCGTCTATTCCCCACGAGCTCATTGAACAATTGAC
CGGCGGCGCCACGCCGATGACGGCCGAACAGATCAACGCCACCACCATGGCGCTGAAGAAAGCGCTGATCGAGCGTGCGC
TGGGCGCAGAGCTGTCGTACCACCTGGGCTATCCGCCCGGCAGCGCCCGCCCCGAGGATGCAGCCAACCAGCGCAACGGC
AAGTCCGCCAAGACGGTGCTGACTCAGGACGGGCCGCTGCGCATCGAGGTGCCGCGCGACCGCGCAGGCTCCTTCGAGCC
CATCCTGATCCCCAAGCACGAGCGGCGTTTCACGGGCTTTGACGACAAGATCGTGGCCATGTACGCGCGGGGCATGACCG
TGCGTGAGATCCAGGGCTTCCTGGCTGAGCAGTACGGCACCGAGGTCAGTCCTGAATTCATCAGTTGTGTCACGGATGAG
GTGATGGCCGAGGTCACCGCCTGGCAGGGCAGGCCGTTGGAGCCGATGTACCCGGTCGTATTCTTCGACTGTCTGCGGGT
CAAGATCCGCGAGGATGCCGTGGTGCGCAACAAGGCCATCTATCTGGCGCTGGGCGTGCTGCCCGACGGTACGCGCGACA
TCCTGGGCCTGTGGATCGAGAACACCGAAGGGGCCAAGTTCTGGATGAAGGTGTTCAACGATCTGAAGACGCGCGGCGTG
GCCGACATCCTGATTGCCGTCACCGACGGGCTCAAGGGCATTCCCGAGGCGCTTGGGGCGGTGTTTCCGGCCACGACGCT
GCAGACCTGTATCGTGCACTTGATCCGCAACAGCCTGGACTATGCCAGCTGGAAGGACCGCAAAGCGCTGGCTGCGGCGC
TCAAGCCCATCTACACGGCGCCCAGCGCAGAAGCCGCAGCGGTCGAACTCGATGCCCTGGAGGCTGGCCCCTGGGGGCAG
AAGTTCCCCACGGTGGTGGCGACCTGGCGCCGGGCCTGGGACCGCGTCATTCCGTTTTTTGCGTTCAGCCCGGCGGTGCG
CAGAGTGATCTACACGACCAATGCCATCGAGAGCCTGCACAGTCAGCTGCGCAAGATCATCAAGACGCGGGGGCACTTTC
CCAATGACGAGGCCGCCACCAAGCTGCTGTGGCTGGCCTTGCGCAACATCACGGCTGACTGGGGCCGAGCAGCCAGGGAG
TGGAAAGACGCCATGAACCAGTTCGCCATCGCCTAG

Protein sequence :
MPSKKKPAAAGMTALPSIPHELIEQLTGGATPMTAEQINATTMALKKALIERALGAELSYHLGYPPGSARPEDAANQRNG
KSAKTVLTQDGPLRIEVPRDRAGSFEPILIPKHERRFTGFDDKIVAMYARGMTVREIQGFLAEQYGTEVSPEFISCVTDE
VMAEVTAWQGRPLEPMYPVVFFDCLRVKIREDAVVRNKAIYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGV
ADILIAVTDGLKGIPEALGAVFPATTLQTCIVHLIRNSLDYASWKDRKALAAALKPIYTAPSAEAAAVELDALEAGPWGQ
KFPTVVATWRRAWDRVIPFFAFSPAVRRVIYTTNAIESLHSQLRKIIKTRGHFPNDEAATKLLWLALRNITADWGRAARE
WKDAMNQFAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 5e-82 47
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 3e-90 45
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 5e-82 45
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 1e-76 44
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 3e-78 44