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Name : tkt (SERP0912) Accession : YP_188491.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 920892 - 922880 bp Length : 1989 bp Strand : + Note : identified by similarity to EGAD:29878; match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232 DNA sequence : ATGTTTAATGAAAAAGATCAATTAGCTATAGATACGATACGTGCTTTAAGCATTGATGCAATCGAAAAAGCAAATTCAGG ACACCCTGGATTACCTATGGGAGCAGCACCTATGGCGTATACTTTATGGACGCGCCACCTTAATTTTAACCCTCAATCTA AAGATTTTTTTAATAGAGATAGATTTATTCTATCAGCAGGTCATGGTTCGGCTTTATTGTATAGCTTATTACATGTCTCT GGTAGTTTAGAACTTGAAGAACTTAAACAATTTAGACAATGGGGTTCGAAGACGCCTGGACATCCAGAATATAGACATAC TGATGGCGTAGAAGTTACTACTGGTCCATTAGGTCAAGGTTTTGCCATGTCTGTAGGGATGGCGTTAGCAGAAAGTCATT TAGCAGGTAAATTTAATAAGGACCAATTTGATATAGTTAATCATTACACTTATGTATTAGCGTCAGATGGTGACTTAATG GAAGGTATCTCACATGAAGCTGCATCTTTTGCAGGTCATAATCAGTTAGATAAATTAATTGTCCTTTATGATTCAAATGA TATATCTTTAGATGGAGATTTAGATAAATCATTTTCTGAAGATACAAAACAGCGTTTCGAAGCCTATGGTTGGAACTATA TTCTAGTTGAAAATGGTAACGATTTAGATGAGATTGATAATGCAATCACTCAAGCTAAATCACAACAAGGACCTACTATT ATCGAAGTTAAAACTATTATCGGTTTTGGTTCTCCTAATAAAGCTGGTTCAAATGGAGTTCATGGTGCCCCACTTGGTGA AGAAGAACGTGCACTTACATTTAAAGAATATGGATTAGATCCTGAAAAACGTTTTAATGTTCCTGAAGATGTATACGAAA TATTTAAATCAACAATGTTAAAACGTGCAAATGAAAATGAAGAGGCTTGGAATAATATGCTTAAAAATTATAGTGAAGCC TATCCGGAATTAGCTGAAGAATTTAAATTAGCAATGAGTGGTAAGTTACCAAATAATTACGCTGATGCCTTACCAGAATA TGATTTAAATCACAGTGGTGCTTCTAGAGCTGATTCAGGAGAAATAATTCAAAAATTAAGCGAGTTTGTACCTTCATTCT TTGGTGGATCAGCAGACTTAGCAGGTTCAAATAAATCTAACGTTAAAGAAGCTAAAGATTATAATAAAGATACTCCAGAA GGTAAAAACGTATGGTTTGGTGTACGTGAATTTGCAATGGGAGCAGCAATAAACGGCATGGCAGCACATGGTGGACTTCA TCCATATGCAGCAACATTCTTTGTATTCAGTGATTACCTAAAACCAGCTTTACGATTATCATCAATCATGGGACTCAATT CAACGTTCATCTTTACTCATGATTCAATTGCTGTAGGTGAAGATGGCCCTACACACGAACCTATTGAACAATTAGCAGGT CTTCGTGCTATTCCTAACATGAATGTTATTCGTCCAGCTGATGGTAATGAAACACGTGTAGCTTGGGAAGTTGCACTTGA ATCAGAACAAACACCAACATCATTAGTGTTAACTCGTCAAAATTTACCAACTTTGGATGTTGATAAACAAACAGTTGAAA ATGGTGTGAGAAAAGGCGCATATATTGTTTTTGAAACAGAACAACAACTTGAATATTTATTATTGGCATCTGGATCAGAA GTTAATTTAGCTGTAGAAGCCGCAAAAGAATTAGAGCAACAAGGTAAAGGTGTACGAGTTATTTCTATGCCAAACTGGTA CGCATTTGAACAACAATCTTCTGAATATAAAGAATCAATTTTACCTTCTGATGTTACTAAACGTATAGCTATCGAAATGG CATCACCACTTGGTTGGCATAAATATGTTGGAATTGAAGGTAAAGTCATTGGTATAAATAGTTTTGGCGCTAGTGCTCCT GGAGATTTAGTAGTTGAAAAGTATGGATTCACTAAAGAAAATATTTTAAAACAAGTCCGTTCATTATAA Protein sequence : MFNEKDQLAIDTIRALSIDAIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDFFNRDRFILSAGHGSALLYSLLHVS GSLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGMALAESHLAGKFNKDQFDIVNHYTYVLASDGDLM EGISHEAASFAGHNQLDKLIVLYDSNDISLDGDLDKSFSEDTKQRFEAYGWNYILVENGNDLDEIDNAITQAKSQQGPTI IEVKTIIGFGSPNKAGSNGVHGAPLGEEERALTFKEYGLDPEKRFNVPEDVYEIFKSTMLKRANENEEAWNNMLKNYSEA YPELAEEFKLAMSGKLPNNYADALPEYDLNHSGASRADSGEIIQKLSEFVPSFFGGSADLAGSNKSNVKEAKDYNKDTPE GKNVWFGVREFAMGAAINGMAAHGGLHPYAATFFVFSDYLKPALRLSSIMGLNSTFIFTHDSIAVGEDGPTHEPIEQLAG LRAIPNMNVIRPADGNETRVAWEVALESEQTPTSLVLTRQNLPTLDVDKQTVENGVRKGAYIVFETEQQLEYLLLASGSE VNLAVEAAKELEQQGKGVRVISMPNWYAFEQQSSEYKESILPSDVTKRIAIEMASPLGWHKYVGIEGKVIGINSFGASAP GDLVVEKYGFTKENILKQVRSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-146 | 47 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-134 | 47 |
