|
Name : katA (SERP0903) Accession : YP_188482.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 914553 - 916067 bp Length : 1515 bp Strand : + Note : identified by similarity to GP:7161885; match to protein family HMM PF00199 DNA sequence : ATGTCAAAACAGGATGGAAAATTAACTGGACTTTTTGGTGCGCCAGTTTCGGATAGAGAAAATAGTATGACAGCAGGACA ACGTGGACCATTATTAATGCAAGACGTTTATTATTTAGAACAAATTTCTCACTTCGATAGAGAAGTGATTCCTGAACGTC GTATGCATGCGAAAGGTTCAGGTGCATTTGGAACGTTCACAGTTACAAATGACATCACACAATATACAAATGCGAAAATA TTCTCAGAAGTCGGAAAACAAACAGAGATGTTTGCACGTTTTTCTACTGTTTCAGGAGAACGTGGAGCAGCAGATTTAGA ACGTGATATACGTGGGTTTGCCTTGAAATTCTACACTGAAGATGGAAACTGGGATTTAGTAGGTAACAATACGCCAGTTT TCTTCTTTAGAGATCCTAAACTATTTATTAGTTTGAATCGTGCTGTAAAACGAGATCCACGTACAAATATGAGAAGTGCA CAAAATAACTGGGACTTTTGGACAGGTCTACCGGAAGCATTGCATCAAGTGACAATATTAATGTCAGATAGAGGTATGCC AAAAGGATTCCGAAATATGCATGGATTCGGTTCTCATACGTATTCTATGTATAATGATAAAGGTGAACGTGTATGGGTTA AATATCATTTCCGTACACAACAAGGAATTGAAAACTATACTGACGAGGAAGCGGCTAAAATTGTAGGTATGGATAGAGAT TCTTCACAGAGGGATTTATATAATGCTATCGAAAATGGAGATTATCCAAAATGGAAAATGTACATTCAAGTTATGACAGA GGAACAAGCTAAAAATCATCCAGACAATCCTTTTGATTTAACAAAGGTATGGTATAAAAAAGACTATCCACTGATTGAAG TGGGAGAATTTGAATTGAATCGTAATCCTGAGAATTATTTTCTTGATGTAGAGCAGGCAGCGTTTACGCCTACAAATATT GTTCCTGGGTTAGATTATTCACCAGATAAAATGCTACAAGGACGTTTATTCTCATATGGAGATGCCCAACGTTATCGTTT AGGAGTTAATCATTGGCAGATTCCTGTCAATCAACCTAAGGGAGTTGGAGTTGAGAACTTGTGTCCATTTAGTCGTGATG GACAAATGCGTTTCTTAGATAATAACCAAGGTGGAGGCCCACATTATTATCCTAATAATCAAGGTATATATGAGTCACAG CCTGAACACAAGAAGCCACCATTCCCGACAGATGGTGATGGTTATGAATATAATTATCGCCAGGATGATGACAATTACTT TGAACAGCCAGGTAAATTATTCAGATTACAGTCTGAAGATGCAAAAGAGCGTATCTTCACAAATACAGCTAATGCAATGG ATGGGGTCTCTAAAGATGTCAAAGTTCGCCACATTCGCCACTGCTATAAAGCTGATCCAGAATATGGGAAAGGTGTAGCA AAAGCTTTAGGTATTGATATCAATCAAATAGATTTAGAGACAAATCAAGACGAAACATATGAAAACTTTAAATAA Protein sequence : MSKQDGKLTGLFGAPVSDRENSMTAGQRGPLLMQDVYYLEQISHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTNAKI FSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSA QNNWDFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRD SSQRDLYNAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKKDYPLIEVGEFELNRNPENYFLDVEQAAFTPTNI VPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSRDGQMRFLDNNQGGGPHYYPNNQGIYESQ PEHKKPPFPTDGDGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMDGVSKDVKVRHIRHCYKADPEYGKGVA KALGIDINQIDLETNQDETYENFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 6e-138 | 61 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 3e-89 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 3e-87 | 43 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 3e-87 | 43 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 3e-87 | 43 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 3e-87 | 43 |
