|
Name : nrdE (SERP0397) Accession : YP_187990.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : 1.17.4.1 Position : 398490 - 400595 bp Length : 2106 bp Strand : + Note : Catalyzes the rate-limiting step in dNTP synthesis DNA sequence : ATGAAAACCATGGAAGAAAAGAAATACAATCATATTGAATTAAATAATGAAGTGACCAAGAGAAAAGACAATGGTTTCTT TGATTTAGAGAAAGATCAAGAAGCATTGAAAGTGTATCTTGAAGAAATCCATGATAAAATGATTTCTTTTGATGATGAAA TCGAAAGACTTCATTATCTTGTTGATAATAATTTTTATTTTAATGTTTTCGAAAAATATAGCGAAGCAGAATTAATTGAA ATTACTGAATACGCAAAATCAATTCACTTCCAATTTGCTAGTTATATGTCGGCAAGTAAGTTTTATAAGGATTACGCTTT AAAAACGAATGATAAAACTAAGTTTCTTGAGGATTATAATCAGCACGTCGCAATCGTTGCACTTTATTTAGCGAATGGTA ATGTTAAACAAGCAAAACAATTTATTTCTGCAATGGTGGAACAACGTTATCAACCGGCGACACCAACATTCTTGAATGCA GGTAGAGCAAGACGTGGAGAACTTGTTTCATGTTTCTTATTAGAAGTAGACGATAGCTTAAATTCTATCAATTTCATTGA TTCAACTGCAAAACAACTTAGTAAAATTGGTGGTGGTGTGGCCATTAATTTATCGAAACTTCGTGCACGTGGAGAAGCAA TTAAAGGAATTAAAGGTGTAGCTAAAGGTGTTTTACCTGTTGCTAAGGCACTTGAAGGTGGATTTAGTTATGCAGATCAA TTAGGACAACGTCCTGGCGCTGGGGCAGTGTACTTAAATATTTTCCATTACGATGTTGAAGAGTTTTTAGATACTAAGAA AGTGAATGCAGATGAAGATTTACGTTTATCTACTATTTCGACTGGTCTTATTGTACCTTCTAAATTCTTTGATTTGGCTA AAGAGGGTAAAGATTTCTATATGTTTGCACCTCATACAGTTAAACAAGAATACGGTGTGACTTTAGATGATATTGATTTA GAAAAGTATTACGACGATATGGTTGCAAACCCTAATATCGATAAAAAGAAAAAAGACGCACGTGAAATGTTAAATATGAT TGCACAAACACAATTACAGTCTGGTTATCCATATCTTATGTTTAAAGATAATGCAAACAAAGTACATGCGAATTCAAATA TTGGGCAAATTAAAATGAGTAATTTATGTACTGAAATTTTCCAATTACAAGAGACATCAGTAATTAACGACTATGGAATT GAAGATGAAATTAAAAGAGATATTTCATGTAACTTAGGCTCATTGAATATAGTGAATGTTATGGAATCAGGTAAATTCAG AGATTCTGTGTTCACAGGTATGGATGCTCTTACAGTTGTAAGTGATGAAGCAAATATTCAAAATGCACCAGGTGTAAAAA AAGCGAATAGTGAACTACATTCTGTTGGACTAGGAGTAATGAACTTACATGGTTATCTAGCTAAAAATAAAATTGGCTAT GAATCTGAAGAAGCAAAAGACTTTGCTAATATATTCTTTATGATTATGAACTATTATTCCATCGAACGTTCAATGGAAAT TGCAAAAGAGCGTGGAGAAAAGTATCAAGACTTTGAGCAATCAGACTATGCAAATGGTAAATATTTTGAATTCTATACAT CTCAAGAATTTGAACCAAAATTTGAAAAGGTTCGCCAACTTTTTGATGGTATCGATATACCTACTTCAAATGATTGGAAA GAATTGCAAAATAAAGTAGAACAATATGGACTTTATCACGCTTATAGATTAGCTATTGCTCCGACTCAAAGTATTTCTTA TGTTCAAAATGCGACAAGTTCTGTTATGCCTATTGTTGACCAAATTGAACGTCGTACGTATGGAAATGCGGAAACATTTT ATCCAATGCCATTTTTATCACCAGAAACAATGTGGTACTACAAATCAGCATTTAATACTGACCAAATGAAACTTATTGAC TTAGTAGCTACAATTCAAACTCACGTAGACCAAGGTATTTCAACGATACTTTATGTTAATTCAGAAATTTCAACACGTGA ACTTTCAAGATTATATGTATATGCACACCATAAAGGCCTTAAATCTTTATACTATACACGTAATAAATTATTAAGTGTGG AAGAATGTACAAGTTGTGCGATTTAA Protein sequence : MKTMEEKKYNHIELNNEVTKRKDNGFFDLEKDQEALKVYLEEIHDKMISFDDEIERLHYLVDNNFYFNVFEKYSEAELIE ITEYAKSIHFQFASYMSASKFYKDYALKTNDKTKFLEDYNQHVAIVALYLANGNVKQAKQFISAMVEQRYQPATPTFLNA GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPVAKALEGGFSYADQ LGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKQEYGVTLDDIDL EKYYDDMVANPNIDKKKKDAREMLNMIAQTQLQSGYPYLMFKDNANKVHANSNIGQIKMSNLCTEIFQLQETSVINDYGI EDEIKRDISCNLGSLNIVNVMESGKFRDSVFTGMDALTVVSDEANIQNAPGVKKANSELHSVGLGVMNLHGYLAKNKIGY ESEEAKDFANIFFMIMNYYSIERSMEIAKERGEKYQDFEQSDYANGKYFEFYTSQEFEPKFEKVRQLFDGIDIPTSNDWK ELQNKVEQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPETMWYYKSAFNTDQMKLID LVATIQTHVDQGISTILYVNSEISTRELSRLYVYAHHKGLKSLYYTRNKLLSVEECTSCAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 4e-136 | 43 |
