Gene Information

Name : SERP0363 (SERP0363)
Accession : YP_187959.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Virulence
Product : glycosyl transferase, group 2 family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 363278 - 364384 bp
Length : 1107 bp
Strand : +
Note : identified by match to protein family HMM PF00535

DNA sequence :
ATGAAAATCAGAGTCATCGTCCCTTGCTATAATGAAGGCGAAGTCGTTTTGAAAACTTATGACAAATTAACTGAAATAAT
GAAGAAAGATAGTTTAATCAAAAATTATGAATACGATTTACTCTTTATTAACGATGGTAGTACAGATACGACAATACATC
ATATCAAGAATATTGTTGCGTATGATAACCATGTTAAATATCTTTCATTCAGTCGAAACTTTGGCAAAGAAGCTGCAATG
ATTGCTGGCTATCAGCATAGCACAATGCACGACGCGGTGATTATGATTGATGGAGATTTACAACATCCGCCTGAATATAT
TCCACAAATGATAGAGGGTTACATTGAAGGTTATGATCAAGTGGTTGCTAAGAGAAATCGTCAGGGAGAGAATTTTGTAC
GTAAAACTTTGTCTCGTTGTTATTATAAATTAATTAATGCATTTGTAGAGGATATCCAATTTGAAGACGGCGTTGGTGAT
TTTAGATTACTCAGTCGACGTGCAGTTCAAGCTTTAACAACACTTGATGAATATAATCGTTTCTCTAAGGGTCTATTTGA
ATGGATAGGTTATGAAACAAAAGTATTTCAATATGAAAATGTGACGCGTGAAGATGGAGAATCTAAGTGGACTTTTAGAA
AGTTACTCAACTATGGTATTGATGGACTCATCTCTTTTAACAATAAGCCTTTACGCATGATGATATACTTAGGTATGTTC
ACGTTTTCTATCAGTATTTTATATATAATTTATTTATTAATAAATATTTTGATTAATGGTATAAATATACCTGGTTATTT
TACTACGATTGCTGCTATATTATTGTTGGGTGGTATTCAATTAATGTCTATTGGCGTAGTAGGAGAATATATTGGTCGTA
TTTATTATGAAGTTAAACATAGACCGAAGTATATTGTTGAAAACTCTAATATTCAGACTGAGAATCTCGACATGAGATAT
AATGCTTTAAACCTGAATAAAAATAGAAACAACAAGCGTAGTAATGATTTATATAAATTAAGTTCTTTTTATAAAGTTAA
AACATATAGTGATACGTATGCATCAAATTATTCTCAAGATGAAGGTTTTAAAGAGCGTGTACATTAA

Protein sequence :
MKIRVIVPCYNEGEVVLKTYDKLTEIMKKDSLIKNYEYDLLFINDGSTDTTIHHIKNIVAYDNHVKYLSFSRNFGKEAAM
IAGYQHSTMHDAVIMIDGDLQHPPEYIPQMIEGYIEGYDQVVAKRNRQGENFVRKTLSRCYYKLINAFVEDIQFEDGVGD
FRLLSRRAVQALTTLDEYNRFSKGLFEWIGYETKVFQYENVTREDGESKWTFRKLLNYGIDGLISFNNKPLRMMIYLGMF
TFSISILYIIYLLINILINGINIPGYFTTIAAILLLGGIQLMSIGVVGEYIGRIYYEVKHRPKYIVENSNIQTENLDMRY
NALNLNKNRNNKRSNDLYKLSSFYKVKTYSDTYASNYSQDEGFKERVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-41 44
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SERP0363 YP_187959.1 glycosyl transferase, group 2 family protein VFG0670 Protein 1e-42 45