Gene Information

Name : SERP0314 (SERP0314)
Accession : YP_187910.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 317337 - 318098 bp
Length : 762 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
TTGTCGATATTAGAGGTAAGACAGTTGTCAAAAGTCTATGGTGATAAGCAAGCTTTCCAAGAAGTTTTGAAAGAAATTAA
TTTAGATGTTGATGAAGGTGAGTTTATATCAATTATGGGACCTTCTGGTTCAGGAAAGACAACTTTATTAAATGTACTTA
GTTCGATTGATTATATGACTAAAGGATCTATTACAATCAACGGGAAACAACTTGAGAAGTTATCTAATAAGCAATTATCT
GATATTAGAAAAAAAGATATTGGATTTATTTTTCAAGATTATAATATTTTAAATACCTTAACCGTTAAAGAAAATATCAT
GCTTCCACTATCAGTTCAAAAGTTAGATAAACAAATAATGCATGAACGTTATCAACGTATAGTAGAAGCTTTGAACATTA
GTGATATTAGTGATAAATATCCATCAGAGTTGTCAGGTGGACAGCGTCAACGTACCTCAGCAGCAAGGGCATTTATTAAT
TTACCTTCAATTATATTTGCTGATGAGCCTACAGGTGCTTTAGATTCTAAAAGTACACTAGATTTACTTAAGCGTCTTAA
ATATATGAATGAGGAATTTAACACAACCATACTTATGGTGACACATGATCCAGTAGCGGCTAGTTTTTCAAACCGTGTTG
TGATGTTAAAGGATGGACAAATCTTTACTGAGTTGTATCAAGGTGATGATGATAAACAAACGTTTTATAAAGAAATTATA
AGAACGCAAAGTGTACTTGGTGGCATCAATTATGAGCTTTAA

Protein sequence : 
MSILEVRQLSKVYGDKQAFQEVLKEINLDVDEGEFISIMGPSGSGKTTLLNVLSSIDYMTKGSITINGKQLEKLSNKQLS
DIRKKDIGFIFQDYNILNTLTVKENIMLPLSVQKLDKQIMHERYQRIVEALNISDISDKYPSELSGGQRQRTSAARAFIN
LPSIIFADEPTGALDSKSTLDLLKRLKYMNEEFNTTILMVTHDPVAASFSNRVVMLKDGQIFTELYQGDDDKQTFYKEII
RTQSVLGGINYEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SERP0314 YP_187910.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 44