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Name : sitC (SERP0290) Accession : YP_187886.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Virulence Product : ABC transporter substrate-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0803 EC number : - Position : 293030 - 293959 bp Length : 930 bp Strand : - Note : identified by similarity to GP:1617430; match to protein family HMM PF01297 DNA sequence : GTGAAAAAAATTCTCGCTTTAGCAATAGCATTTTTAATTATCCTTGCCGCATGTGGGAATCACAGTAACCATGAACATCA CTCACATGAAGGAAAATTAAAAGTTGTAACTACAAACTCTATTCTCTATGACATGGTTAAACGTGTCGGTGGAAATAAGG TCGATGTTCATAGCATCGTTCCAGTAGGACAAGATCCACATGAATATGAGGTTAAACCTAAAGATATTAAAGCATTAACA GATGCTGACGTTGTATTTTATAATGGTTTAAACCTAGAAACTGGAAATGGTTGGTTTGAAAAAGCACTTGACCAAGCAGG AAAATCAACAAAAGATAAAAATGTGATAGCAGCATCAAATAATGTTAAACCAATATACTTAAATGGTGAGGAAGGTAACA AAAACAAACAAGATCCACATGCATGGTTAAGTTTAGAGAATGGAATTAAATACGTAAAAACAATACAAAAATCACTAGAA CATCATGATAAAAAAGATAAGTCTACATATGAAAAACAAGGGAATGCATATATATCAAAATTAGAAGAACTTAATAAAGA TAGTAAAAATAAATTTGATGACATACCCAAAAATCAACGTGCCATGATGACAAGTGAAGGTGCATTTAAATATTTTGCTC AACAATTCGATGTTAAACCAGGTTATATTTGGGAGATAAACACAGAAAAACAAGGTACACCTGGTCAAATGAAACAAGCC ATTAAATTTGTTAAAGATAATCATTTAAAACATTTATTAGTCGAAACAAGCGTAGATAAAAAAGCTATGCAAAGTTTATC AGAAGAAACTAAGAAAGATATTTATGGTGAAGTATTTACCGACTCTATAGGTAAGGAAGGTACTAAAGGTGACTCATACT ATAAAATGATGAAATCTAATATTGATACAATACATGGTAGTATGAAATAA Protein sequence : MKKILALAIAFLIILAACGNHSNHEHHSHEGKLKVVTTNSILYDMVKRVGGNKVDVHSIVPVGQDPHEYEVKPKDIKALT DADVVFYNGLNLETGNGWFEKALDQAGKSTKDKNVIAASNNVKPIYLNGEEGNKNKQDPHAWLSLENGIKYVKTIQKSLE HHDKKDKSTYEKQGNAYISKLEELNKDSKNKFDDIPKNQRAMMTSEGAFKYFAQQFDVKPGYIWEINTEKQGTPGQMKQA IKFVKDNHLKHLLVETSVDKKAMQSLSEETKKDIYGEVFTDSIGKEGTKGDSYYKMMKSNIDTIHGSMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0577 | NP_814342.1 | adhesion lipoprotein | Virulence | Not named | Protein | 4e-65 | 49 |
| ef0095 | AAM75298.1 | EF0095 | Not tested | Not named | Protein | 3e-65 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitC | YP_187886.1 | ABC transporter substrate-binding protein | VFG2157 | Protein | 5e-71 | 53 |
| sitC | YP_187886.1 | ABC transporter substrate-binding protein | VFG2165 | Protein | 2e-69 | 52 |
| sitC | YP_187886.1 | ABC transporter substrate-binding protein | VFG1359 | Protein | 3e-69 | 50 |
