Gene Information

Name : SERP0029 (SERP0029)
Accession : YP_187629.1
Strain : Staphylococcus epidermidis RP62A
Genome accession: NC_002976
Putative virulence/resistance : Virulence
Product : Cro/CI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 24753 - 24956 bp
Length : 204 bp
Strand : -
Note : identified by match to protein family HMM PF01381

DNA sequence :
TTGCGCAATAGACTTAAAGAATTACGAGCCCGTGATGGATATAACCAAACAGAGCTTGCTAAAAAAGCTGGAATATCACG
ACAAACGGTGTCTTTAATAGAACGCAACGATTTTACACCATCTATATTAACCGCAATAAAAATTGCAAGAATCTTTGGTG
AACCTGTTGAAGATATCTTTATTATGGAGGAGGAAGACTTTTGA

Protein sequence :
MRNRLKELRARDGYNQTELAKKAGISRQTVSLIERNDFTPSILTAIKIARIFGEPVEDIFIMEEEDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 8e-05 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 6e-05 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SERP0029 YP_187629.1 Cro/CI family transcriptional regulator VFG2175 Protein 2e-05 45
SERP0029 YP_187629.1 Cro/CI family transcriptional regulator VFG2168 Protein 2e-05 45