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Name : hlb (SERP2544) Accession : YP_190085.1 Strain : Staphylococcus epidermidis RP62A Genome accession: NC_002976 Putative virulence/resistance : Virulence Product : beta-hemolysin Function : - COG functional category : R : General function prediction only COG ID : COG3568 EC number : - Position : 2602224 - 2603228 bp Length : 1005 bp Strand : + Note : identified by similarity to OMNI:SA2003; match to protein family HMM PF03372 DNA sequence : ATGAAACGAGGTGTAACAATATTGAATTGGCAACGTAAATGTATACTAACTACTTTGTTGGTTTTAAGTAGTTTATTTTT AGTATTTTCGACTATCACATATGCGAGTGAACGTGATTTTAAAGACAGTCTTAAAATCACTACACACAACGTGTATTTCT TACCTACTGCTATCTACCCTAATTGGGGACAATCTCAGCGCGCTGATTTAATTTCAAAAGCAGATTACATTCAAAATCAA GATGTCGTGATTCTAAATGAATTATTTGATAAAAAAGCTTCTAAAAGATTGTTAACACGTCTACATTCACAGTACCCCTA TCAAACACCTATCGTTGGTAAGGGTACAGAAGGTTGGCAAAATACTTCTGGTACTTATAGAAAAATTAAAAAAGTAAGTG GTGGCGTTGGTATTGTGAGTAAATGGCCTATCGTACAACAAGAACAACATATTTATAAAAAAGGTTGTGGGGCTGATATG GCAGGTAATAAAGGCTTTGCCTACATTAAAATTAATAAGAATGGCAAATACCACCATATTATCGGAACACATCTACAAGC TGAAGATCCAACATGCTTTAAAGGAAAAGATAAGGACATTAGACAGAGTCAAATGAGTGAAATTAAACAGTTTATCAAAG ACAAGAATATCCCTAAAAATGAACCCGTCTATATCGGTGGTGACTTAAATGTCATTAAAGATTCAGATGAATATCAACAA ATGGCAAATAACTTAAATGTTTCATTACCTACTCAATTCGATGGTAATGCATATAGTTGGGATACTAGCAGTAATAGTAT TGCGAAATATAATTATCCTAAATTAGAACCTCAACACTTAGATTATATTTTATTAGATCGTGACCATGCACAACCAAGCT CATGGCATAATGATACACATAGAGTGAAGTCACCAGAATGGTCCGTGAAATCTTGGGGTAAAACATACAAATACAATGAT TACTCAGATCATTACCCACTCTCTGGCTATGCATCAAATGAATAG Protein sequence : MKRGVTILNWQRKCILTTLLVLSSLFLVFSTITYASERDFKDSLKITTHNVYFLPTAIYPNWGQSQRADLISKADYIQNQ DVVILNELFDKKASKRLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQHIYKKGCGADM AGNKGFAYIKINKNGKYHHIIGTHLQAEDPTCFKGKDKDIRQSQMSEIKQFIKDKNIPKNEPVYIGGDLNVIKDSDEYQQ MANNLNVSLPTQFDGNAYSWDTSSNSIAKYNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYND YSDHYPLSGYASNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAA70683.2 | sphingomyelinase-c | Virulence | LIPI-2 | Protein | 2e-79 | 54 |
| hlb | NP_646757.1 | truncated beta-hemplysin | Not tested | ¥ÕSa3 | Protein | 6e-68 | 53 |
| hlb | NP_375112.1 | hypothetical protein | Not tested | ¥ÕSa3 | Protein | 4e-68 | 53 |
| truncated-hlb | NP_372527.1 | hypothetical protein | Not tested | ¥ÕSa3 | Protein | 3e-68 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlb | YP_190085.1 | beta-hemolysin | VFG0674 | Protein | 1e-79 | 54 |
| hlb | YP_190085.1 | beta-hemolysin | VFG1798 | Protein | 1e-73 | 53 |
